RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MKNK1Q9BUB5 465 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 EDEM2Q9BV94 578 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 LMAN1LQ9HAT1 526 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 RXFP1Q9HBX9 757 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 PKD2L1Q9P0L9 805 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 DDX19BQ9UMR2 479 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 NFASCO94856 1347 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 DOCK5Q9H7D0 1870 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 SPDYE3A6NKU9 549 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 FOXP2O15409 715 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 VTNP04004 478 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 HOXA9P31269 272 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 MPLP40238 635 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 PHKA2P46019 1235 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 HAND2P61296 217 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 FZD5Q13467 585 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 WDR5BQ86VZ2 330 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 TICAM2Q86XR7 235 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 CKAP2LQ8IYA6 745 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 FAM3CQ92520 227 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 KXD1Q9BQD3 176 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
YBX3-211ENST00000541351 BRD9Q9H8M2 597 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 JADE2Q9NQC1 790 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 GDE1Q9NZC3 331 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 MYH15Q9Y2K3 1946 aa10.75□□□□□ -0.69
YBX3-211ENST00000541351 DSPP15924 2871 aaKnown RBP10.75□□□□□ -0.69
YBX3-211ENST00000541351 CCDC163A0A0D9SF12 145 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 ZNF213O14771 459 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 AKAP3O75969 853 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 CCDC192P0DO97 292 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 SFPQP23246 707 aaKnown RBP eCLIP10.74□□□□□ -0.69
YBX3-211ENST00000541351 KIF5BP33176 963 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 SATB1Q01826 763 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 DSG1Q02413 1049 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 PLA2G2CQ5R387 149 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
YBX3-211ENST00000541351 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 PDXDC2PQ6P474 469 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 GRASPQ7Z6J2 395 aaPredicted RBP10.74□□□□□ -0.69
YBX3-211ENST00000541351 PALB2Q86YC2 1186 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
YBX3-211ENST00000541351 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 BCL7CQ8WUZ0 217 aaPredicted RBP10.74□□□□□ -0.69
YBX3-211ENST00000541351 PIGSQ96S52 555 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 RIOX1Q9H6W3 641 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 FNIP2Q9P278 1114 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 TCEAL9Q9UHQ7 104 aa10.74□□□□□ -0.69
YBX3-211ENST00000541351 C4orf47A7E2U8 309 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 TK2O00142 265 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 TGM5O43548 720 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 RPP40O75818 363 aaKnown RBP10.73□□□□□ -0.69
YBX3-211ENST00000541351 C22orf31O95567 290 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 DARSP14868 501 aaKnown RBP10.73□□□□□ -0.69
YBX3-211ENST00000541351 ITGB5P18084 799 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 RAP1GAPP47736 663 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 DGKKQ5KSL6 1271 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 PPM1LQ5SGD2 360 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 HEATR6Q6AI08 1181 aaKnown RBP10.73□□□□□ -0.69
YBX3-211ENST00000541351 MIS18BP1Q6P0N0 1132 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 C19orf48Q6RUI8 117 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 GAB3Q8WWW8 586 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 FAM167AQ96KS9 214 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 GCOM2Q9BZD3 368 aaPredicted RBP10.73□□□□□ -0.69
YBX3-211ENST00000541351 KRT23Q9C075 422 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 TRPV5Q9NQA5 729 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 ZNF302Q9NR11 478 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 CACNA2D2Q9NY47 1150 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 SEC63Q9UGP8 760 aaKnown RBP10.73□□□□□ -0.69
YBX3-211ENST00000541351 POLIQ9UNA4 740 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 UBIAD1Q9Y5Z9 338 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 CNTNAP2Q9UHC6 1331 aa10.73□□□□□ -0.69
YBX3-211ENST00000541351 ADAMTS20P59510 1910 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 PALM3A6NDB9 673 aaPredicted RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 NRP1O14786 923 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 GIPC1O14908 333 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 SMARCA5O60264 1052 aaPredicted RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 ZNF623O75123 536 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 OFD1O75665 1012 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 ATG7O95352 703 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 POU2F2P09086 479 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 SPATA31D3P0C874 917 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 MYBP10242 640 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 MLLT6P55198 1093 aaPredicted RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 TROAPQ12815 778 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 SRSF5Q13243 272 aaKnown RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 ELF2Q15723 593 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 COL28A1Q2UY09 1125 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 USP41Q3LFD5 358 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 MCMDC2Q4G0Z9 681 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 SPATA31D4Q6ZUB0 917 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms