RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 IFT74Q96LB3 600 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 CSRNP2Q9H175 543 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 AAASQ9NRG9 546 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 BLOC1S4Q9NUP1 217 aa14.49□□□□□ -0.09
LTBR-208ENST00000541005 PHLPP2Q6ZVD8 1323 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 A0A1B0GUA9 196 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 INPPL1O15357 1258 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 B4GALT5O43286 388 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 HIP1RO75146 1068 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 F13A1P00488 732 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 PLA2G4BP0C869 781 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 PLCG1P19174 1290 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 MARCKSP29966 332 aaPredicted RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 EFNA5P52803 228 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 DMP1Q13316 513 aaPredicted RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 MAPK6Q16659 721 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 GLB1LQ6UWU2 654 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 AGMOQ6ZNB7 445 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 COLGALT1Q8NBJ5 622 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 RNF169Q8NCN4 708 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 SMG8Q8ND04 991 aaKnown RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 DEPTORQ8TB45 409 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 HELQQ8TDG4 1101 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 KCNN1Q92952 543 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 CPB2Q96IY4 423 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 ZNF396Q96N95 335 aaPredicted RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
LTBR-208ENST00000541005 ARHGAP28Q9P2N2 729 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 HCSTQ9UBK5 93 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
LTBR-208ENST00000541005 CARNS1A5YM72 827 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 MEIS3P2A8K0S8 358 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 ACKR2O00590 384 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 GRM6O15303 877 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 YEATS4O95619 227 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 ITGB1P05556 798 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 NPTX2P47972 431 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 UBE3AQ05086 875 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 KARSQ15046 597 aaKnown RBP14.47□□□□□ -0.09
LTBR-208ENST00000541005 SLC27A1Q6PCB7 646 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.47□□□□□ -0.09
LTBR-208ENST00000541005 KRI1Q8N9T8 703 aaKnown RBP14.47□□□□□ -0.09
LTBR-208ENST00000541005 KLHL23Q8NBE8 558 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 LINC00301Q8NCQ3 95 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 RAD54LQ92698 747 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 SYMPKQ92797 1274 aaKnown RBP14.47□□□□□ -0.09
LTBR-208ENST00000541005 LPPQ93052 612 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 PLIN2Q99541 437 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 KIFC3Q9BVG8 833 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 EIF2AQ9BY44 585 aaKnown RBP14.47□□□□□ -0.09
LTBR-208ENST00000541005 IPPQ9Y573 584 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 PCDHB12Q9Y5F1 795 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 TCF20Q9UGU0 1960 aaKnown RBP14.47□□□□□ -0.09
LTBR-208ENST00000541005 UNC80Q8N2C7 3258 aa14.47□□□□□ -0.09
LTBR-208ENST00000541005 PPP6R2O75170 966 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 OFD1O75665 1012 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 PRKCBP05771 671 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 PPM1AP35813 382 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 CEBPZQ03701 1054 aaKnown RBP14.46□□□□□ -0.09
LTBR-208ENST00000541005 PKP1Q13835 747 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 CAMK1Q14012 370 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 COL19A1Q14993 1142 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 CCDC85BQ15834 202 aaPredicted RBP14.46□□□□□ -0.09
LTBR-208ENST00000541005 ARSHQ5FYA8 562 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 NOMO2Q5JPE7 1267 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 ATL3Q6DD88 541 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 USP49Q70CQ1 688 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 MICALL1Q8N3F8 863 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 SPPL3Q8TCT6 385 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 SPIRE2Q8WWL2 714 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 EPSTI1Q96J88 318 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 NTPCRQ9BSD7 190 aaKnown RBP14.46□□□□□ -0.09
LTBR-208ENST00000541005 TMEM134Q9H6X4 195 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 RSAD1Q9HA92 442 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 UBN1Q9NPG3 1134 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 TBC1D13Q9NVG8 400 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 STK17AQ9UEE5 414 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 KCNG1Q9UIX4 513 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 ODF2LQ9ULJ1 636 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 LZTS1Q9Y250 596 aa14.46□□□□□ -0.09
LTBR-208ENST00000541005 RBM19Q9Y4C8 960 aaKnown RBP14.46□□□□□ -0.09
LTBR-208ENST00000541005 TTLL13PA6NNM8 815 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 N4BP3O15049 544 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 SPTLC2O15270 562 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 EDN1P05305 212 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
LTBR-208ENST00000541005 PLS3P13797 630 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 ANK1P16157 1881 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 TXLNAP40222 546 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 ZNF131P52739 623 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 PEX3P56589 373 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 PLCB3Q01970 1234 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 PRPF4BQ13523 1007 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 STK38Q15208 465 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 SPOUT1Q5T280 376 aaKnown RBP14.45□□□□□ -0.1
LTBR-208ENST00000541005 KCNT2Q6UVM3 1135 aa14.45□□□□□ -0.1
LTBR-208ENST00000541005 HACE1Q8IYU2 909 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms