RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ALCAMQ13740 583 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 MAEAQ7L5Y9 396 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 PRIMPOLQ96LW4 560 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 HDAC6Q9UBN7 1215 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 A0A1W2PQ45 241 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 A0A1W2PQY0 241 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 DNM1LO00429 736 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 CABYRO75952 493 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 NR3C1P04150 777 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 IGBP1P78318 339 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ADAM9Q13443 819 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 SLC43A3Q8NBI5 491 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ASAP3Q8TDY4 903 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 U2AF1L4Q8WU68 220 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 POLR3FQ9H1D9 316 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 LARSQ9P2J5 1176 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 GTF2IRD1Q9UHL9 959 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 LUC7L2Q9Y383 392 aaKnown RBP13.66□□□□□ -0.22
SMAD3-204ENST00000540846 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
SMAD3-204ENST00000540846 GOLGA6L9A6NEM1 432 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 SGPL1O95470 568 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-204ENST00000540846 PLS3P13797 630 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
SMAD3-204ENST00000540846 GLRA2P23416 452 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 RPL13P26373 211 aaKnown RBP13.65□□□□□ -0.22
SMAD3-204ENST00000540846 KLK7P49862 253 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 CLCN3P51790 818 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-204ENST00000540846 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 KCNA1Q09470 495 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 RAD9BQ6WBX8 426 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 REXO1L1PQ8IX06 675 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
SMAD3-204ENST00000540846 MAGEB2O15479 319 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 TREHO43280 583 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 TUBB4AP04350 444 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 GJA8P48165 433 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 NCKAP1LP55160 1127 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 ZBED6P86452 979 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 MTF1Q14872 753 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 MEA1Q16626 185 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 ZC2HC1CQ53FD0 456 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-204ENST00000540846 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-204ENST00000540846 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 EXOC8Q8IYI6 725 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 GOLGA5Q8TBA6 731 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 KCNN1Q92952 543 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
SMAD3-204ENST00000540846 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
SMAD3-204ENST00000540846 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-204ENST00000540846 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD3-204ENST00000540846 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 K7ENM7 598 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 CCDC175P0C221 793 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 NPTX2P47972 431 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 ITGA7Q13683 1181 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 CAPSQ13938 189 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 IER5Q5VY09 327 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 C7orf31Q8N865 590 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 PRPF31Q8WWY3 499 aaKnown RBP13.63□□□□□ -0.23
SMAD3-204ENST00000540846 PCMTD1Q96MG8 357 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-204ENST00000540846 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 JPH2Q9BR39 696 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-204ENST00000540846 MKNK1Q9BUB5 465 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 EDEM3Q9BZQ6 932 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
SMAD3-204ENST00000540846 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
SMAD3-204ENST00000540846 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms