RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SORBS3O60504 671 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 CNMDO75829 334 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MAGEA1P43355 309 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ACTR2P61160 394 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 PPATQ06203 517 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 KIF5AQ12840 1032 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ALCAMQ13740 583 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 GJB7Q6PEY0 223 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ACCSQ96QU6 501 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 TMEM206Q9H813 350 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 PDLIM7Q9NR12 457 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 PTPRFP10586 1907 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 SLC16A4O15374 487 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ICAM3P32942 547 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 FMO5P49326 533 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PEX3P56589 373 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 JAM2P57087 298 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 MOGSQ13724 837 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CBWD6Q4V339 395 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CBWD3Q5JTY5 395 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CBWD5Q5RIA9 395 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 FAM102BQ5T8I3 360 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PAPD7Q5XG87 772 aaKnown RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CCDC60Q8IWA6 550 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 C12orf56Q8IXR9 622 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 DNERQ8NFT8 737 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CDHR1Q96JP9 859 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 TSGA10Q9BZW7 698 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 FRMD4BQ9Y2L6 1034 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PSAPP07602 524 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 TRIM49P0CI25 452 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 TRIM49CP0CI26 452 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 SOX10P56693 466 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ARID5AQ03989 594 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ASIC2Q16515 512 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 TDRD12Q587J7 1177 aaKnown RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ZSWIM2Q8NEG5 633 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 GCNT4Q9P109 453 aa11.68□□□□□ -0.54
CLIP1-210ENST00000538120 ANKRD62A6NC57 917 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 SPDYE5A6NIY4 337 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 CXCL11O14625 94 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 EXOC3O60645 756 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 IVLP07476 585 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ATP4AP20648 1035 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-210ENST00000538120 TUBB4BP68371 445 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 SP4Q02446 784 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 STXBP2Q15833 593 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 IQCEQ6IPM2 695 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 RDH13Q8NBN7 331 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 TMEM161BQ8NDZ6 487 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ATP6V0A1Q93050 837 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
CLIP1-210ENST00000538120 HPCAL4Q9UM19 191 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 KCNH4Q9UQ05 1017 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 SAR1BQ9Y6B6 198 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 CAPN6Q9Y6Q1 641 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 PFASO15067 1338 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 A0A087X0T9 212 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 ATG7O95352 703 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 FAM228BP0C875 321 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 EDNRBP24530 442 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 NPTX2P47972 431 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 DLG4P78352 724 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 KLHL30Q0D2K2 578 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 BFSP1Q12934 665 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 GNPTABQ3T906 1256 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
CLIP1-210ENST00000538120 USP50Q70EL3 339 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms