RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 DMP1Q13316 513 aaPredicted RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 PKP1Q13835 747 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 KARSQ15046 597 aaKnown RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 PTPROQ16827 1216 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 GLB1LQ6UWU2 654 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 LRRC43Q8N309 656 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 SYMPKQ92797 1274 aaKnown RBP14.26□□□□□ -0.13
CCS-209ENST00000534763 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 MTUS1Q9ULD2 1270 aa14.26□□□□□ -0.13
CCS-209ENST00000534763 H0YCG3 227 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 RFXAPO00287 272 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 INPPL1O15357 1258 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCS-209ENST00000534763 PLS3P13797 630 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 LAG3P18627 525 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 IGFBP4P22692 258 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 CTNNB1P35222 781 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 NPTX2P47972 431 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 GATMP50440 423 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 SMTNP53814 917 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 PEX3P56589 373 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 GPM6BQ13491 265 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 PAN2Q504Q3 1202 aaKnown RBP14.25□□□□□ -0.13
CCS-209ENST00000534763 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 CLLU1OSQ5K130 101 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 SLC27A1Q6PCB7 646 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 CCDC73Q6ZRK6 1079 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 HACE1Q8IYU2 909 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 MRPL38Q96DV4 380 aaKnown RBP14.25□□□□□ -0.13
CCS-209ENST00000534763 CLIC6Q96NY7 704 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 PLIN2Q99541 437 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 TYW1Q9NV66 732 aaKnown RBP14.25□□□□□ -0.13
CCS-209ENST00000534763 LARSQ9P2J5 1176 aaKnown RBP14.25□□□□□ -0.13
CCS-209ENST00000534763 ARHGAP28Q9P2N2 729 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 KANSL3Q9P2N6 904 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
CCS-209ENST00000534763 PCDHB12Q9Y5F1 795 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
CCS-209ENST00000534763 COL6A3P12111 3177 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 TRANK1O15050 2925 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 K7ERI5 159 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 N4BP3O15049 544 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 CUTAO60888 179 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 OFD1O75665 1012 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 PRKCBP05771 671 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 ABCD1P33897 745 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 ZNF131P52739 623 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 UBE3AQ05086 875 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
CCS-209ENST00000534763 RRAGBQ5VZM2 374 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 AGMOQ6ZNB7 445 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
CCS-209ENST00000534763 RNF169Q8NCN4 708 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 SMG8Q8ND04 991 aaKnown RBP14.24□□□□□ -0.13
CCS-209ENST00000534763 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 GDPD5Q8WTR4 605 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 CWH43Q9H720 699 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 KMT5AQ9NQR1 393 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 RCOR1Q9UKL0 485 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 ZDHHC9Q9Y397 364 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 IPPQ9Y573 584 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 RALGAPA2Q2PPJ7 1873 aa14.24□□□□□ -0.13
CCS-209ENST00000534763 CCDC169A6NNP5 214 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 B4GALT5O43286 388 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 MCM6Q14566 821 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 NOMO2Q5JPE7 1267 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 SPECC1Q5M775 1068 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 LRRC55Q6ZSA7 311 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 GPBP1Q86WP2 473 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 SLC17A8Q8NDX2 589 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 HELQQ8TDG4 1101 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 CPB2Q96IY4 423 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 EIF2AQ9BY44 585 aaKnown RBP14.23□□□□□ -0.13
CCS-209ENST00000534763 TRIM6Q9C030 488 aaPredicted RBP14.23□□□□□ -0.13
CCS-209ENST00000534763 CUEDC2Q9H467 287 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 RSAD1Q9HA92 442 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 PLAGL2Q9UPG8 496 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 LZTS1Q9Y250 596 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 GIT1Q9Y2X7 761 aa14.23□□□□□ -0.13
CCS-209ENST00000534763 ITGA4P13612 1032 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
CCS-209ENST00000534763 PPM1AP35813 382 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 PLCB3Q01970 1234 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
CCS-209ENST00000534763 GIT2Q14161 759 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 DCAF4L1Q3SXM0 396 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 TIGD5Q53EQ6 642 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
CCS-209ENST00000534763 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
CCS-209ENST00000534763 SV2BQ7L1I2 683 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 TMEM161BQ8NDZ6 487 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 URGCPQ8TCY9 931 aa14.22□□□□□ -0.13
CCS-209ENST00000534763 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms