RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 HOXA11P31270 313 aaPredicted RBP26.64■■□□□ 1.86
SIPA1-210ENST00000534406 NCKAP1LP55160 1127 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 ASIC1P78348 528 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 TMEM132AQ24JP5 1023 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 FAM117BQ6P1L5 589 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 SFR1Q86XK3 245 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 FAM178BQ8IXR5 827 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 TMEM161BQ8NDZ6 487 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 TMEM134Q9H6X4 195 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 SEL1LQ9UBV2 794 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 K7ERI5 159 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 ACKR2O00590 384 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 TRAK2O60296 914 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 STAG3L1P0CL83 205 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 ARF4P18085 180 aaPredicted RBP26.63■■□□□ 1.85
SIPA1-210ENST00000534406 SCP2P22307 547 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 RAB27AP51159 221 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 RABGGTBP53611 331 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 PRPF4BQ13523 1007 aaKnown RBP26.63■■□□□ 1.85
SIPA1-210ENST00000534406 RAB30Q15771 203 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 CNNM4Q6P4Q7 775 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 CPB2Q96IY4 423 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 TRAIPQ9BWF2 469 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 LRFN2Q9ULH4 789 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 PCDHA11Q9Y5I1 949 aa26.63■■□□□ 1.85
SIPA1-210ENST00000534406 FRMD3A2A2Y4 597 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 TLL1O43897 1013 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 AFMP43652 599 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 LONRF3Q496Y0 759 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 CCDC65Q8IXS2 484 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 SLC17A8Q8NDX2 589 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 C7orf25Q9BPX7 421 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 PBX4Q9BYU1 374 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 PANK4Q9NVE7 773 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 MSRAQ9UJ68 235 aa26.62■■□□□ 1.85
SIPA1-210ENST00000534406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.61■■□□□ 1.85
SIPA1-210ENST00000534406 A0A0U1RQF3 1178 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 SOX1O00570 391 aaPredicted RBP26.61■■□□□ 1.85
SIPA1-210ENST00000534406 MAPTP10636 758 aaKnown RBP26.61■■□□□ 1.85
SIPA1-210ENST00000534406 SKIP12755 728 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 FAM189BP81408 668 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 FAM160A1Q05DH4 1040 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 STRN3Q13033 797 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 CLEC17AQ6ZS10 378 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 TAS1R3Q7RTX0 852 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 ECHDC2Q86YB7 292 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 GRAMD1CQ8IYS0 662 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 KCNN1Q92952 543 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 PAGE5Q96GU1 130 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 ELAC1Q9H777 363 aaKnown RBP26.61■■□□□ 1.85
SIPA1-210ENST00000534406 FAM105AQ9NUU6 356 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 TMEM161AQ9NX61 479 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 PCDHB7Q9Y5E2 793 aa26.61■■□□□ 1.85
SIPA1-210ENST00000534406 N4BP3O15049 544 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 ZNF202O95125 648 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 EDN1P05305 212 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 DNAJB2P25686 324 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 ABCD1P33897 745 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 COASYQ13057 564 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 HERC4Q5GLZ8 1057 aaPredicted RBP26.6■■□□□ 1.85
SIPA1-210ENST00000534406 KRBA2Q6ZNG9 492 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 HAUS6Q7Z4H7 955 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 FMR1NBQ8N0W7 255 aaPredicted RBP26.6■■□□□ 1.85
SIPA1-210ENST00000534406 CNNM3Q8NE01 707 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 CCDC34Q96HJ3 373 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 GBP4Q96PP9 640 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 FIZ1Q96SL8 496 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 YME1L1Q96TA2 773 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 RAD9AQ99638 391 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 MRPL4Q9BYD3 311 aaKnown RBP26.6■■□□□ 1.85
SIPA1-210ENST00000534406 COL4A6Q14031 1691 aa26.6■■□□□ 1.85
SIPA1-210ENST00000534406 PBX2P40425 430 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 HTRA4P83105 476 aaPredicted RBP26.59■■□□□ 1.85
SIPA1-210ENST00000534406 UBXN11Q5T124 520 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 SLC27A1Q6PCB7 646 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 CRIPAKQ8N1N5 446 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 BLZF1Q9H2G9 400 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 OLFML3Q9NRN5 406 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 YBX2Q9Y2T7 364 aaKnown RBP26.59■■□□□ 1.85
SIPA1-210ENST00000534406 INSL6Q9Y581 213 aa26.59■■□□□ 1.85
SIPA1-210ENST00000534406 A0A1B0GUA9 196 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 TTLL13PA6NNM8 815 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 GADD45BO75293 160 aaPredicted RBP26.58■■□□□ 1.85
SIPA1-210ENST00000534406 MYL1P05976 194 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 ATF7P17544 494 aaPredicted RBP26.58■■□□□ 1.85
SIPA1-210ENST00000534406 CASP1P29466 404 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 NMT1P30419 496 aaKnown RBP26.58■■□□□ 1.85
SIPA1-210ENST00000534406 CUL4BQ13620 913 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 RNF169Q8NCN4 708 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 TIFAQ96CG3 184 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 ADPGKQ9BRR6 497 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 TRIM6Q9C030 488 aaPredicted RBP26.58■■□□□ 1.85
SIPA1-210ENST00000534406 ST6GALNAC4Q9H4F1 302 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 PDZD7Q9H5P4 517 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 MRPL44Q9H9J2 332 aaKnown RBP26.58■■□□□ 1.85
SIPA1-210ENST00000534406 PCDHB2Q9Y5E7 798 aa26.58■■□□□ 1.85
SIPA1-210ENST00000534406 HOXA2O43364 376 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 GTPBP6O43824 516 aaPredicted RBP26.57■■□□□ 1.84
SIPA1-210ENST00000534406 ZNF623O75123 536 aa26.57■■□□□ 1.84
SIPA1-210ENST00000534406 EOMESO95936 686 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms