RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ARL4AP40617 200 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 KIR2DL1P43626 348 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 KIR2DL2P43627 348 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 EPHB3P54753 998 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 CCNA1P78396 465 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 EXOSC9Q06265 439 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 GRB10Q13322 594 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 RASGRF1Q13972 1273 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 ATP2B3Q16720 1220 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 BNC2Q6ZN30 1099 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 SND1Q7KZF4 910 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 RNF180Q86T96 592 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 NLRX1Q86UT6 975 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 RELL1Q8IUW5 271 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 FAM178BQ8IXR5 827 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 SLFN12Q8IYM2 578 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 TMEM199Q8N511 208 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 ENOX1Q8TC92 643 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 TGFBRAP1Q8WUH2 860 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 LPIN2Q92539 896 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 BORCS6Q96GS4 357 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 SCLYQ96I15 445 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 MAML3Q96JK9 1138 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 XYLT2Q9H1B5 865 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 TRPV6Q9H1D0 765 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 RPAP3Q9H6T3 665 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 CRTAC1Q9NQ79 661 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 STARD7Q9NQZ5 370 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 TCFL5Q9UL49 500 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 DENND2AQ9ULE3 1009 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 ZBTB21Q9ULJ3 1066 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 COG5Q9UP83 839 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 PA2G4Q9UQ80 394 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 SLC4A7Q9Y6M7 1214 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 DDX49Q9Y6V7 483 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 ARAP2Q8WZ64 1704 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 MGAMO43451 1857 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 GRIN2DO15399 1336 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 CFAP47Q6ZTR5 3102 aa3.66□□□□□ -1.82
CHMP4A-208ENST00000534106 RIF1Q5UIP0 2472 aaKnown RBP3.65□□□□□ -1.82
CHMP4A-208ENST00000534106 NCOR2Q9Y618 2525 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A1W2PRG0 241 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 H3BQ06 376 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 ARVCFO00192 962 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 CILPO75339 1184 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SNAI1O95863 264 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PF4P02776 101 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 MPOP05164 745 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 ASGR1P07306 291 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SYPP08247 313 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 ALADP13716 330 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PNLIPP16233 465 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 ATP2A2P16615 1042 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 POU3F3P20264 500 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 KCNA5P22460 613 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 GUCY1A2P33402 732 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 MFAP1P55081 439 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PSMC6P62333 389 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 DYNLL1P63167 89 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 RNF4P78317 190 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 BEX3Q00994 111 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TAP1Q03518 808 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PLP2Q04941 152 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TCF15Q12870 199 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PSMD2Q13200 908 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 CAMK2GQ13555 558 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 RAB3GAP1Q15042 981 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 CCDC27Q2M243 656 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SKOR2Q2VWA4 1001 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 RABL6Q3YEC7 729 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TMEM63BQ5T3F8 832 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 LBX2Q6XYB7 198 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 DEFB128Q7Z7B8 93 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 ADGRA1Q86SQ6 560 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 FOXP4Q8IVH2 680 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TEX11Q8IYF3 940 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 KLHDC9Q8NEP7 349 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SYTL5Q8TDW5 730 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 GATAD2BQ8WXI9 593 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 DACT3Q96B18 629 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 NSUN4Q96CB9 384 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TCTN2Q96GX1 697 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 MAP6Q96JE9 813 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 FEZ1Q99689 392 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 TINF2Q9BSI4 451 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 NOC4LQ9BVI4 516 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SPATC1LQ9H0A9 340 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 USP44Q9H0E7 712 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 WNT8AQ9H1J5 351 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 CNTD2Q9H8S5 307 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 RNF19AQ9NV58 838 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 GNL3LQ9NVN8 582 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 AATFQ9NY61 560 aaKnown RBP eCLIP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 RALYQ9UKM9 306 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 MTUS1Q9ULD2 1270 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 MROH7-TTC4A0A0A0MT08 1334 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 CLSPNQ9HAW4 1339 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 SALL1Q9NSC2 1324 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms