RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RABL6Q3YEC7 729 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 NFRKBQ6P4R8 1299 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 TMEM270Q6UE05 265 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 CATSPER4Q7RTX7 472 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 NRKQ7Z2Y5 1582 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 TRIM59Q8IWR1 403 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 RYBPQ8N488 228 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ARHGEF40Q8TER5 1519 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 LZICQ8WZA0 190 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 NLRP4Q96MN2 994 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 CD209Q9NNX6 404 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 TMEM247A6NEH6 219 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 SNUPNO95149 360 aaKnown RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 AGTP01019 485 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 GFAPP14136 432 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 CDR2Q01850 454 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 KIAA1841Q6NSI8 718 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 CCDC137Q6PK04 289 aaKnown RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ANO5Q75V66 913 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 KLHL23Q8NBE8 558 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 SPATA4Q8NEY3 305 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 OLFM3Q96PB7 478 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 TGS1Q96RS0 853 aaKnown RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 C11orf70Q9BRQ4 267 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 MRGBPQ9NV56 204 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 KCND2Q9NZV8 630 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 FBXO2Q9UK22 296 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-236ENST00000533667 SNX12Q9UMY4 172 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 ZHX2Q9Y6X8 837 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 SPATA31A3Q5VYP0 1347 aa7.45□□□□□ -1.22
CTNND1-236ENST00000533667 POTEB3A0JP26 581 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 DENND3A2RUS2 1198 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SPDYE2BA6NHP3 402 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 POTECB2RU33 542 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 GOLGA8MH3BSY2 632 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 KRT14P02533 472 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SPDYE6P0CI01 402 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 STAT3P40763 770 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 OSTNP61366 133 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 TSTA3Q13630 321 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CRYMQ14894 314 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 LLGL1Q15334 1064 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 PPP6R3Q5H9R7 873 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 POTEBQ6S5H4 581 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 STAG2Q8N3U4 1231 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CATSPER1Q8NEC5 780 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 TTC8Q8TAM2 541 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 PIP4K2CQ8TBX8 421 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CEP95Q96GE4 821 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF512BQ96KM6 892 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ACAP3Q96P50 834 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 PARVAQ9NVD7 372 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SUCLA2Q9P2R7 463 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 UVRAGQ9P2Y5 699 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 MKL2Q9ULH7 1088 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 L3MBTL1Q9Y468 752 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF335Q9H4Z2 1342 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 TBX3O15119 743 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 TEX33O43247 280 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 HUS1O60921 280 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 RTN2O75298 545 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CYP2D6P10635 497 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 GNA15P30679 374 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 HSPA9P38646 679 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 MORF4L2Q15014 288 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 HLFQ16534 295 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CDO1Q16878 200 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 KIF19Q2TAC6 998 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF772Q68DY9 489 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 HEATR6Q6AI08 1181 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 CAPRIN2Q6IMN6 1127 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 LRRC31Q6UY01 552 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 RINLQ6ZS11 566 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 RASGRP2Q7LDG7 609 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 THNSL1Q8IYQ7 743 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 LRRC43Q8N309 656 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 GPD1LQ8N335 351 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 MSL3Q8N5Y2 521 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 GCNAQ96QF7 691 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 POLR3CQ9BUI4 534 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 MRPL4Q9BYD3 311 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 DDX47Q9H0S4 455 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 GJB4Q9NTQ9 266 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 BFARQ9NZS9 450 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SLC13A4Q9UKG4 626 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SMG5Q9UPR3 1016 aaKnown RBP7.44□□□□□ -1.22
CTNND1-236ENST00000533667 FIS1Q9Y3D6 152 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 COL15A1P39059 1388 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 SMAPO00193 183 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 YY1P25490 414 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 PRDX5P30044 214 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ROR1Q01973 937 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 OCA2Q04671 838 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 INAQ16352 499 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF568Q3ZCX4 644 aa7.44□□□□□ -1.22
CTNND1-236ENST00000533667 C1orf146Q5VVC0 180 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms