RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 DCNP07585 359 aaKnown RBP14.61□□□□□ -0.07
COPB1-209ENST00000533096 HMGB1P09429 215 aaKnown RBP14.61□□□□□ -0.07
COPB1-209ENST00000533096 NONOQ15233 471 aaKnown RBP eCLIP14.61□□□□□ -0.07
COPB1-209ENST00000533096 TSGA10IPQ3SY00 556 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 ZNF410Q86VK4 478 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 GLYCTKQ8IVS8 523 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
COPB1-209ENST00000533096 CCDC148Q8NFR7 591 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 PRPF31Q8WWY3 499 aaKnown RBP14.61□□□□□ -0.07
COPB1-209ENST00000533096 MYADMQ96S97 322 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 CEP89Q96ST8 783 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 NCOA5Q9HCD5 579 aaKnown RBP14.61□□□□□ -0.07
COPB1-209ENST00000533096 WNT16Q9UBV4 365 aa14.61□□□□□ -0.07
COPB1-209ENST00000533096 INPPL1O15357 1258 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 TEX28O15482 410 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 ITGA4P13612 1032 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 C15orf39Q6ZRI6 1047 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 ANO5Q75V66 913 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 MRPL10Q7Z7H8 261 aaKnown RBP14.6□□□□□ -0.07
COPB1-209ENST00000533096 SMG7Q92540 1137 aaKnown RBP14.6□□□□□ -0.07
COPB1-209ENST00000533096 RABGGTAQ92696 567 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 STAMQ92783 540 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 B3GALT6Q96L58 329 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 APOL6Q9BWW8 343 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 IFT122Q9HBG6 1241 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 COL4A3BPQ9Y5P4 624 aa14.6□□□□□ -0.07
COPB1-209ENST00000533096 FNDC1Q4ZHG4 1894 aaPredicted RBP14.6□□□□□ -0.07
COPB1-209ENST00000533096 KMT2EQ8IZD2 1858 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 MARCH6O60337 910 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 GLUD1P00367 558 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 ADH1AP07327 375 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 RCAN1P53805 252 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 PSMC5P62195 406 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 DCLK2Q8N568 766 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 RDM1Q8NG50 284 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 RMDN1Q96DB5 314 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 CEP170P1Q96L14 293 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 GAD1Q99259 594 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 JPH2Q9BR39 696 aaPredicted RBP14.59□□□□□ -0.07
COPB1-209ENST00000533096 LARP6Q9BRS8 491 aaKnown RBP14.59□□□□□ -0.07
COPB1-209ENST00000533096 MINDY3Q9H8M7 445 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 TBC1D17Q9HA65 648 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 WDR6Q9NNW5 1121 aaKnown RBP14.59□□□□□ -0.07
COPB1-209ENST00000533096 AGPAT5Q9NUQ2 364 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 SSX2IPQ9Y2D8 614 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 SIT1Q9Y3P8 196 aa14.59□□□□□ -0.07
COPB1-209ENST00000533096 PTPRZ1P23471 2315 aaPredicted RBP14.59□□□□□ -0.07
COPB1-209ENST00000533096 USP34Q70CQ2 3546 aa14.58□□□□□ -0.07
COPB1-209ENST00000533096 F8W810 466 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 EML1O00423 815 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 SOD2P04179 222 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 HOXA11P31270 313 aaPredicted RBP14.58□□□□□ -0.08
COPB1-209ENST00000533096 LAMTOR4Q0VGL1 99 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 NTRK3Q16288 839 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 Q4G0T1 1027 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 UBXN11Q5T124 520 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 ELMSAN1Q6PJG2 1045 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 DGLUCYQ7Z3D6 616 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 SLC7A3Q8WY07 619 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 RSPH1Q8WYR4 309 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 MIOSQ9NXC5 875 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 STK39Q9UEW8 545 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 PCDHA4Q9UN74 947 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 HES2Q9Y543 173 aa14.58□□□□□ -0.08
COPB1-209ENST00000533096 MED19A0JLT2 244 aaPredicted RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 NR1I2O75469 434 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 QARSP47897 775 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 GLUD2P49448 558 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 SSRP1Q08945 709 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 NCBP1Q09161 790 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 GET4Q7L5D6 327 aaPredicted RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 SRGAP1Q7Z6B7 1085 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 CMASQ8NFW8 434 aaPredicted RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 COLEC11Q9BWP8 271 aa14.57□□□□□ -0.08
COPB1-209ENST00000533096 EIF2AQ9BY44 585 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
COPB1-209ENST00000533096 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 CYP3A7-CYP3A51PA0A087WV96 503 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 ARL5CA6NH57 179 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 ZBTB39O15060 712 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 LRRN2O75325 713 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 ERLIN2O94905 339 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 SP9P0CG40 484 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 SRFP11831 508 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 LAMP2P13473 410 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 NCLP19338 710 aaKnown RBP14.56□□□□□ -0.08
COPB1-209ENST00000533096 CYP3A7P24462 503 aa14.56□□□□□ -0.08
COPB1-209ENST00000533096 PDIA3P30101 505 aaKnown RBP14.56□□□□□ -0.08
COPB1-209ENST00000533096 MLH1P40692 756 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms