RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CPB2Q96IY4 423 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 ZBED2Q9BTP6 218 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 DACT1Q9NYF0 836 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 USP20Q9Y2K6 914 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 PTPRSQ13332 1948 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 GOLGA6L4A6NEF3 574 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 K7ERI5 159 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 EDN1P05305 212 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 PRKCBP05771 671 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 SLFN14P0C7P3 912 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 ARF4P18085 180 aaPredicted RBP27.35■■□□□ 1.97
USP48-214ENST00000532737 SYKP43405 635 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 MAPK6Q16659 721 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 TWF2Q6IBS0 349 aaKnown RBP27.35■■□□□ 1.97
USP48-214ENST00000532737 TAS1R3Q7RTX0 852 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 NPAS4Q8IUM7 802 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.35■■□□□ 1.97
USP48-214ENST00000532737 TMEM161BQ8NDZ6 487 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 LRRC27Q9C0I9 530 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 MAGEF1Q9HAY2 307 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 KCNG1Q9UIX4 513 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 YBX2Q9Y2T7 364 aaKnown RBP27.35■■□□□ 1.97
USP48-214ENST00000532737 PCDHA11Q9Y5I1 949 aa27.35■■□□□ 1.97
USP48-214ENST00000532737 ACKR2O00590 384 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 TLL1O43897 1013 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 AXLP30530 894 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 SMTNP53814 917 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 NCKAP1LP55160 1127 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 NCBP1Q09161 790 aaKnown RBP27.34■■□□□ 1.97
USP48-214ENST00000532737 UBXN11Q5T124 520 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 ECHDC2Q86YB7 292 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 CEP57L1Q8IYX8 460 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 PRIMPOLQ96LW4 560 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 FIZ1Q96SL8 496 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 TRAIPQ9BWF2 469 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 TRIM9Q9C026 710 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 TMEM134Q9H6X4 195 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 TTC3P53804 2025 aa27.34■■□□□ 1.97
USP48-214ENST00000532737 A0A0U1RQF3 1178 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 AFMP43652 599 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 HTRA4P83105 476 aaPredicted RBP27.33■■□□□ 1.97
USP48-214ENST00000532737 AMPD3Q01432 767 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 RAB30Q15771 203 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 CSPP1Q1MSJ5 1256 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 GRAMD1CQ8IYS0 662 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 RAD9AQ99638 391 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 C7orf25Q9BPX7 421 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 USP25Q9UHP3 1055 aa27.33■■□□□ 1.97
USP48-214ENST00000532737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.32■■□□□ 1.96
USP48-214ENST00000532737 TRAK2O60296 914 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 GADD45BO75293 160 aaPredicted RBP27.32■■□□□ 1.96
USP48-214ENST00000532737 STAG3L1P0CL83 205 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 MAPTP10636 758 aaKnown RBP27.32■■□□□ 1.96
USP48-214ENST00000532737 IDEP14735 1019 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 DNAJB2P25686 324 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 CASP1P29466 404 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 PRPF4BQ13523 1007 aaKnown RBP27.32■■□□□ 1.96
USP48-214ENST00000532737 NT5DC1Q5TFE4 455 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 CNNM4Q6P4Q7 775 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 NOTUMQ6P988 496 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 CDR2LQ86X02 465 aaPredicted RBP27.32■■□□□ 1.96
USP48-214ENST00000532737 SFR1Q86XK3 245 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 TMEM87AQ8NBN3 555 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 PAGE5Q96GU1 130 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 FAM105AQ9NUU6 356 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 TMEM161AQ9NX61 479 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 MSRAQ9UJ68 235 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 LRFN2Q9ULH4 789 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 PCDHB7Q9Y5E2 793 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 PHLPP2Q6ZVD8 1323 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 CNTNAP2Q9UHC6 1331 aa27.32■■□□□ 1.96
USP48-214ENST00000532737 A0A1B0GUA9 196 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 FRMD3A2A2Y4 597 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 LCHNA4D1U4 455 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 ATF7P17544 494 aaPredicted RBP27.31■■□□□ 1.96
USP48-214ENST00000532737 GAP43P17677 238 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 NMT1P30419 496 aaKnown RBP27.31■■□□□ 1.96
USP48-214ENST00000532737 HAUS6Q7Z4H7 955 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 ZNF598Q86UK7 904 aaKnown RBP27.31■■□□□ 1.96
USP48-214ENST00000532737 CCDC51Q96ER9 411 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 EIF2AQ9BY44 585 aaKnown RBP27.31■■□□□ 1.96
USP48-214ENST00000532737 BLZF1Q9H2G9 400 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 NKX2-4Q9H2Z4 354 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 ELAC1Q9H777 363 aaKnown RBP27.31■■□□□ 1.96
USP48-214ENST00000532737 PANK4Q9NVE7 773 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 INSL6Q9Y581 213 aa27.31■■□□□ 1.96
USP48-214ENST00000532737 DGKIO75912 1065 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 ZNF202O95125 648 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 FAM178BQ8IXR5 827 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 RNF169Q8NCN4 708 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 MYLIPQ8WY64 445 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 KCNN1Q92952 543 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 TIFAQ96CG3 184 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 YME1L1Q96TA2 773 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 COL25A1Q9BXS0 654 aaPredicted RBP27.3■■□□□ 1.96
USP48-214ENST00000532737 PCDHB2Q9Y5E7 798 aa27.3■■□□□ 1.96
USP48-214ENST00000532737 TMEM265A0A087WTH1 108 aa27.29■■□□□ 1.96
USP48-214ENST00000532737 K7ENM7 598 aa27.29■■□□□ 1.96
USP48-214ENST00000532737 ZNF623O75123 536 aa27.29■■□□□ 1.96
USP48-214ENST00000532737 ARHGEF15O94989 841 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms