RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SGMS1Q86VZ5 419 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 FMR1NBQ8N0W7 255 aaPredicted RBP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 PDZD8Q8NEN9 1154 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 NRXN1Q9ULB1 1477 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 GGPS1O95749 300 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 EIF3BP55884 814 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 NME3Q13232 169 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 TTC30BQ8N4P2 665 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 GPBP1L1Q9HC44 474 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 SUCLA2Q9P2R7 463 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 KRT37O76014 449 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 C6orf222P0C671 652 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 PDHBP11177 359 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 IFNAR2P48551 515 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 SLC12A1Q13621 1099 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 SMAP1Q8IYB5 467 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 TEX13BQ9BXU2 312 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 ORC6Q9Y5N6 252 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 MAP3K7O43318 606 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 MFAP3LO75121 409 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 ZNF189O75820 626 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 CCDC197Q8NCU1 140 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 INTS2Q9H0H0 1204 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 MAP3K20Q9NYL2 800 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 UBE2Q2LH0YL09 131 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 GNGT2O14610 69 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 KIAA0391O15091 583 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 EPHA7Q15375 998 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 PARK7Q99497 189 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 FSD1LQ9BXM9 530 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 CNOT10Q9H9A5 744 aaKnown RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 RBAKQ9NYW8 714 aaPredicted RBP15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 APOEP02649 317 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 PLA2G4FQ68DD2 849 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 FAM151AQ8WW52 585 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
PCDHA9-202ENST00000532602 PODXLO00592 558 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 PALMO75781 387 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 TRIM67Q6ZTA4 783 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 CCDC124Q96CT7 223 aaKnown RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 IFT43Q96FT9 208 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 MOSPD1Q9UJG1 213 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 AGLP35573 1532 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ENTPD3O75355 529 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 STMN1P16949 149 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 SUDS3Q9H7L9 328 aaPredicted RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 TMEM247A6NEH6 219 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 SRGAP2O75044 1071 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 TTC23LQ6PF05 361 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ALKBH8Q96BT7 664 aaKnown RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 FAF2Q96CS3 445 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 TUBB6Q9BUF5 446 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 KATNAL1Q9BW62 490 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 PDE11AQ9HCR9 933 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 GSTA4O15217 222 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 SMAD1Q15797 465 aaKnown RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 FAM117BQ6P1L5 589 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ZC3H15Q8WU90 426 aaKnown RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 FMO2Q99518 471 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 C11orf70Q9BRQ4 267 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 TIPINQ9BVW5 301 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 RASGRF2O14827 1237 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 CPB1P15086 417 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 IFNA8P32881 189 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 GPC5P78333 572 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 ZSCAN26Q16670 478 aa15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 PDCD6IPQ8WUM4 868 aaKnown RBP15.75■□□□□ 0.11
PCDHA9-202ENST00000532602 KDM6AO15550 1401 aaPredicted RBP15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 LCP1P13796 627 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 RCN2Q14257 317 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 CYP26B1Q9NR63 512 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 PCSK1NQ9UHG2 260 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 AGO2Q9UKV8 859 aaKnown RBP15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 TOM1L1O75674 476 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 ARL4CP56559 192 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 SBK1Q52WX2 424 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 C9orf131Q5VYM1 1079 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 PHF20Q9BVI0 1012 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 HEY1Q9Y5J3 304 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 GNA15P30679 374 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 CUL1Q13616 776 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 TRIM72Q6ZMU5 477 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 PRMT6Q96LA8 375 aaPredicted RBP15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 KCNJ6P48051 423 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 DRP2Q13474 957 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 ATG16L1Q676U5 607 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 TNIP3Q96KP6 325 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 GBP5Q96PP8 586 aa15.74■□□□□ 0.11
PCDHA9-202ENST00000532602 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms