RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 GRIN1Q05586 938 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 TRMT1LQ7Z2T5 733 aaKnown RBP23.34■■□□□ 1.33
PKP3-205ENST00000527442 CKAP2LQ8IYA6 745 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 LRRC43Q8N309 656 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 METTL13Q8N6R0 699 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 CLIC6Q96NY7 704 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 IRF2BPLQ9H1B7 796 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 POMKQ9H5K3 350 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 DENND4AQ7Z401 1863 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 GOLGA6L4A6NEF3 574 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 C2CD4DB7Z1M9 353 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 TXKP42681 527 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 TMC7Q7Z402 723 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 IGSF22Q8N9C0 903 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 BBXQ8WY36 941 aaPredicted RBP23.33■■□□□ 1.33
PKP3-205ENST00000527442 CASP10Q92851 521 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 AK8Q96MA6 479 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 RIT2Q99578 217 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 ZNF577Q9BSK1 485 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 CSRNP2Q9H175 543 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 SMOC2Q9H3U7 446 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 TTC12Q9H892 705 aaPredicted RBP23.33■■□□□ 1.33
PKP3-205ENST00000527442 NR2E1Q9Y466 385 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 HCFC2Q9Y5Z7 792 aa23.33■■□□□ 1.33
PKP3-205ENST00000527442 FAM237AA0A1B0GTK4 181 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 IPO5O00410 1097 aaKnown RBP23.32■■□□□ 1.32
PKP3-205ENST00000527442 HOXA2O43364 376 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 GALR2O43603 387 aaPredicted RBP23.32■■□□□ 1.32
PKP3-205ENST00000527442 MARCH6O60337 910 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 PSMD10O75832 226 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 CMA1P23946 247 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 SPIRE1Q08AE8 756 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 CLLU1OSQ5K130 101 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 RESP18Q5W5W9 173 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 SHC4Q6S5L8 630 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 ECHDC2Q86YB7 292 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 RAB34Q9BZG1 259 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 SPG21Q9NZD8 308 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 PCDHA12Q9UN75 941 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 SORCS3Q9UPU3 1222 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 MAFBQ9Y5Q3 323 aaPredicted RBP23.32■■□□□ 1.32
PKP3-205ENST00000527442 MYO15AQ9UKN7 3530 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 SPTBN4Q9H254 2564 aa23.32■■□□□ 1.32
PKP3-205ENST00000527442 MBD3O95983 291 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 NLRP11P59045 1033 aaKnown RBP23.31■■□□□ 1.32
PKP3-205ENST00000527442 KRT17Q04695 432 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 MTMR3Q13615 1198 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 PDIA5Q14554 519 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 TPRNQ4KMQ1 711 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 LRCH2Q5VUJ6 765 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 ABI1Q8IZP0 508 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 SLC39A11Q8N1S5 342 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 TMEM105Q8N8V8 129 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 RNF169Q8NCN4 708 aa23.31■■□□□ 1.32
PKP3-205ENST00000527442 C2orf71A6NGG8 1288 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 NUBP1P53384 320 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 PPP2R5CQ13362 524 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 SMC1AQ14683 1233 aaKnown RBP23.3■■□□□ 1.32
PKP3-205ENST00000527442 B3GNT9Q6UX72 402 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 UBALD2Q8IYN6 164 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 LINC01465Q8N7H1 131 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 MRPL43Q8N983 215 aaKnown RBP23.3■■□□□ 1.32
PKP3-205ENST00000527442 GJA10Q969M2 543 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 ZNF668Q96K58 619 aaPredicted RBP23.3■■□□□ 1.32
PKP3-205ENST00000527442 TEKT3Q9BXF9 490 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 ADAM7Q9H2U9 754 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 ADAMTS10Q9H324 1103 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 TBC1D22BQ9NU19 505 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 AKT3Q9Y243 479 aa23.3■■□□□ 1.32
PKP3-205ENST00000527442 PROB1E7EW31 1015 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 GAS7O60861 476 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 CLASP2O75122 1294 aaKnown RBP23.29■■□□□ 1.32
PKP3-205ENST00000527442 WEE2P0C1S8 567 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 CES5AQ6NT32 575 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 ZNF746Q6NUN9 644 aaPredicted RBP23.29■■□□□ 1.32
PKP3-205ENST00000527442 ASCL5Q7RTU5 278 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 LRRC71Q8N4P6 559 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 FSIP1Q8NA03 581 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 NECTIN4Q96NY8 510 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 HPSEQ9Y251 543 aa23.29■■□□□ 1.32
PKP3-205ENST00000527442 POTEMA6NI47 508 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 ASGR2P07307 311 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 ZSCAN20P17040 1043 aaPredicted RBP23.28■■□□□ 1.32
PKP3-205ENST00000527442 EIF4BP23588 611 aaKnown RBP23.28■■□□□ 1.32
PKP3-205ENST00000527442 ITIH3Q06033 890 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 EFCAB12Q6NXP0 572 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 HELQQ8TDG4 1101 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 MAP7D2Q96T17 732 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 CCSER1Q9C0I3 900 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 GOLPH3LQ9H4A5 285 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 GABBR1Q9UBS5 961 aa23.28■■□□□ 1.32
PKP3-205ENST00000527442 NT5C1B-RDH14C9J2C7 533 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 MAGEB2O15479 319 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 SLC26A4O43511 780 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 PSAPP07602 524 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 PFKFB1P16118 471 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 CA8P35219 290 aa23.27■■□□□ 1.32
PKP3-205ENST00000527442 RARS2Q5T160 578 aaKnown RBP23.27■■□□□ 1.32
PKP3-205ENST00000527442 CCDC73Q6ZRK6 1079 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms