RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	SMTNL1	A8MU46	457 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TMCO5B	A8MYB1	307 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	EPB41L2	O43491	1005 aa	Known RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	DDAH1	O94760	285 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SNUPN	O95149	360 aa	Known RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GC	P02774	474 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SOD2	P04179	222 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	IVL	P07476	585 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	MYBL2	P10244	700 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	PTPN1	P18031	435 aa	Known RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	PTGS1	P23219	599 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CHML	P26374	656 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	KRTAP10-11	P60412	298 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	PSMC1	P62191	440 aa	Known RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TPM4	P67936	248 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CRHR2	Q13324	411 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CRYM	Q14894	314 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SLC10A6	Q3KNW5	377 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TBC1D25	Q3MII6	688 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	FILIP1L	Q4L180	1135 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	WDR78	Q5VTH9	848 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	BTBD8	Q5XKL5	378 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NAIF1	Q69YI7	327 aa	Predicted RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TTC19	Q6DKK2	380 aa	Predicted RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	KCNT2	Q6UVM3	1135 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	PRIMA1	Q86XR5	153 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SAMD3	Q8N6K7	520 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CCDC191	Q8NCU4	936 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SHCBP1	Q8NEM2	672 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	C17orf50	Q8WW18	174 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SYAP1	Q96A49	352 aa	Predicted RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	ZNF764	Q96H86	408 aa	Predicted RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RMI1	Q9H9A7	625 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GALNT8	Q9NY28	637 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RCAN3	Q9UKA8	241 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CDC42EP3	Q9UKI2	254 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	BLOC1S6	Q9UL45	172 aa		4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SOS1	Q07889	1333 aa	Predicted RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RPGRIP1L	Q68CZ1	1315 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	FAM47E-STBD1	D6RA91	191 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	IPO5	O00410	1097 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SLC26A4	O43511	780 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RPS6KA5	O75582	802 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	LMNA	P02545	664 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GCFC2	P16383	781 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	VAMP1	P23763	118 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RDX	P35241	583 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GPR85	P60893	370 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	MRPS21	P82921	87 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	IFT88	Q13099	833 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TMED1	Q13445	227 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CCDC184	Q52MB2	194 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TNNI3K	Q59H18	835 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GJC2	Q5T442	439 aa	Predicted RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GORAB	Q5T7V8	394 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TMEM200B	Q69YZ2	307 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	EEPD1	Q7L9B9	569 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	FILIP1	Q7Z7B0	1213 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NT5DC4	Q86YG4	428 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NLGN4X	Q8N0W4	816 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GPR150	Q8NGU9	434 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	OR14K1	Q8NGZ2	314 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TDRD7	Q8NHU6	1098 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NTN5	Q8WTR8	489 aa	Predicted RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	DNAAF4	Q8WXU2	420 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CRACR2A	Q9BSW2	395 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	C22orf23	Q9BZE7	217 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	IPPK	Q9H8X2	491 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	INCENP	Q9NQS7	918 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	GNL3L	Q9NVN8	582 aa	Known RBP	4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	LCMT1	Q9UIC8	334 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	ZMYM4	Q5VZL5	1548 aa		4.25	□□□□□ -1.73
CLNS1A-209	ENST00000527299	MAPK8IP3	Q9UPT6	1336 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	EIF4G1	Q04637	1599 aa	Known RBP	4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299		A0A0G2JNJ9	132 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	KIF2A	O00139	706 aa	Predicted RBP	4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	AGRP	O00253	132 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NEBL	O76041	1014 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	RHOBTB3	O94955	611 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NUDT3	O95989	172 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	VDR	P11473	427 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	ELF1	P32519	619 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	TRPC1	P48995	793 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	MEOX1	P50221	254 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	SCNN1G	P51170	649 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NEDD9	Q14511	834 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	ZRSR1	Q15695	479 aa	Known RBP	4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	NTRK3	Q16288	839 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	FXN	Q16595	210 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	LONRF3	Q496Y0	759 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CCDC178	Q5BJE1	867 aa		4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	MBNL2	Q5VZF2	373 aa	Known RBP	4.24	□□□□□ -1.73
CLNS1A-209	ENST00000527299	CAVIN1	Q6NZI2	390 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms