RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 NOVP48745 357 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 NHLH1Q02575 133 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 TRDNQ13061 729 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 NEDD9Q14511 834 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 CLUL1Q15846 466 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 CELF3Q5SZQ8 465 aaKnown RBP7.19□□□□□ -1.26
PABPC1-220ENST00000522658 CCDC62Q6P9F0 684 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.19□□□□□ -1.26
PABPC1-220ENST00000522658 SAMD3Q8N6K7 520 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-220ENST00000522658 CUL5Q93034 780 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 IL17RAQ96F46 866 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 FAM227BQ96M60 508 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 PRRX2Q99811 253 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 KRT23Q9C075 422 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 LMAN2LQ9H0V9 348 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 CPVLQ9H3G5 476 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 SH2B1Q9NRF2 756 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-220ENST00000522658 TMEM63CQ9P1W3 806 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 DDX41Q9UJV9 622 aaKnown RBP7.19□□□□□ -1.26
PABPC1-220ENST00000522658 NEDD4P46934 1319 aa7.19□□□□□ -1.26
PABPC1-220ENST00000522658 B4E1Z4 1266 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 H3BRB1 525 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 GCOM1H8Y6P7 765 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 STXBP3O00186 592 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 DDX3YO15523 660 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 LGALS2P05162 132 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 RB1P06400 928 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 POLR2MP0CAP2 368 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SRGAP2BP0DMP2 458 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 TGFB3P10600 412 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SPINK2P20155 84 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 UBA1P22314 1058 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 CDC25BP30305 580 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 HTRA4P83105 476 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 ZNF200P98182 395 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SP4Q02446 784 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 ZP2Q05996 745 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 NMIQ13287 307 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SMAD4Q13485 552 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 BTG3Q14201 252 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 PLEKHG4Q58EX7 1191 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SPOUT1Q5T280 376 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 UTP14CQ5TAP6 766 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SERINC5Q86VE9 423 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 TICAM2Q86XR7 235 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 TBC1D10CQ8IV04 446 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 NEK9Q8TD19 979 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 OTUD7AQ8TE49 926 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 UTP4Q969X6 686 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 KLHDC7BQ96G42 594 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 MYRFLQ96LU7 910 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 FBXL18Q96ME1 805 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 PDCD2LQ9BRP1 358 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 TUT1Q9H6E5 874 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 C7orf69Q9H7B7 122 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 CD320Q9NPF0 282 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 MAP3K20Q9NYL2 800 aaKnown RBP7.18□□□□□ -1.26
PABPC1-220ENST00000522658 CD207Q9UJ71 328 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 SALL4Q9UJQ4 1053 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 PCDHA1Q9Y5I3 950 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 ADGRA3Q8IWK6 1321 aa7.18□□□□□ -1.26
PABPC1-220ENST00000522658 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 NCOR1O75376 2440 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 PRR19A6NJB7 356 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 HAS3O00219 553 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 ZBTB5O15062 677 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 FOXP2O15409 715 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 STAM2O75886 525 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 RPLP2P05387 115 aaKnown RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 FGRP09769 529 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 GHRP10912 638 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 HOXA13P31271 388 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 PDE1AP54750 535 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 PGM5Q15124 567 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 PKN1Q16512 942 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 HSDL1Q3SXM5 330 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 RNF43Q68DV7 783 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 TAF2Q6P1X5 1199 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 RALYLQ86SE5 291 aaKnown RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 ZNF589Q86UQ0 364 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 TRIM42Q8IWZ5 723 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 SMARCC2Q8TAQ2 1214 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 UBASH3BQ8TF42 649 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 TNPO1Q92973 898 aaKnown RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 TOP1MTQ969P6 601 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 EHMT1Q9H9B1 1298 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 COL20A1Q9P218 1284 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 CNTN3Q9P232 1028 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 SEC63Q9UGP8 760 aaKnown RBP7.17□□□□□ -1.26
PABPC1-220ENST00000522658 MUTYHQ9UIF7 546 aa7.17□□□□□ -1.26
PABPC1-220ENST00000522658 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms