RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 KDM3BQ7LBC6 1761 aa8.6□□□□□ -1.03
SPIDR-215ENST00000521798 ABHD14A-ACY1A0A1B0GW23 586 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 WTIPA6NIX2 430 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 STARD3NLO95772 234 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 SNRPA1P09661 255 aaKnown RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 MYBP10242 640 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 STK3Q13188 491 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 OGFOD3Q6PK18 319 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 CLEC4GQ6UXB4 293 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 OTOP3Q7RTS5 596 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 OVCH2Q7RTZ1 564 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 NAT16Q8N8M0 369 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 SH3RF2Q8TEC5 729 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 TEX13AQ9BXU3 409 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 USP36Q9P275 1121 aaKnown RBP8.59□□□□□ -1.03
SPIDR-215ENST00000521798 TSPYL4Q9UJ04 414 aa8.59□□□□□ -1.03
SPIDR-215ENST00000521798 FAM155AB1AL88 458 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-215ENST00000521798 CHL1O00533 1208 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 SCDO00767 359 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 FKTNO75072 461 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 A1BGP04217 495 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 CENPBP07199 599 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-215ENST00000521798 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 COL6A2P12110 1019 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 GYS1P13807 737 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 HALP42357 657 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 EIF5P55010 431 aaKnown RBP8.58□□□□□ -1.04
SPIDR-215ENST00000521798 MOGSQ13724 837 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 CEP68Q76N32 757 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 FAM9BQ8IZU0 186 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 FAM156AQ8NDB6 213 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 GATA6Q92908 595 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 MAP3K14Q99558 947 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 EPB41L1Q9H4G0 881 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
SPIDR-215ENST00000521798 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 ANAPC4Q9UJX5 808 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 COL15A1P39059 1388 aa8.58□□□□□ -1.04
SPIDR-215ENST00000521798 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 USP42Q9H9J4 1324 aaKnown RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 FAM227AF5H4B4 570 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 NKRFO15226 690 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 CLASP2O75122 1294 aaKnown RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 ZNF853P0CG23 659 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 TYRP1P17643 537 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 POLD1P28340 1107 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 RFC4P35249 363 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 ECE1P42892 770 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 TM4SF4P48230 202 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 PIP4K2AP48426 406 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 NRG1Q02297 640 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 GAB4Q2WGN9 574 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 CPZQ66K79 652 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 Q6ZNB5 142 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 CXorf67Q86X51 503 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 SMAP1Q8IYB5 467 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 GRAMD1CQ8IYS0 662 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 NOP53Q9NZM5 478 aaKnown RBP8.57□□□□□ -1.04
SPIDR-215ENST00000521798 LUZP4Q9P127 313 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 MKL2Q9ULH7 1088 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 X6R8D5 127 aa8.57□□□□□ -1.04
SPIDR-215ENST00000521798 TMEM82A0PJX8 343 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 CCER2I3L3R5 266 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 NDUFS2O75306 463 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 TUSC2O75896 110 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 OSMP13725 252 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 ZKSCAN1P17029 563 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 FPR2P25090 351 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 FAM193AP78312 1265 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 EPHA7Q15375 998 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 KRT24Q2M2I5 525 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 EP400NLQ6ZTU2 488 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 BEND4Q6ZU67 534 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 KCNK18Q7Z418 384 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 DZIP1LQ8IYY4 767 aaKnown RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 CPXCR1Q8N123 301 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 C16orf92Q96LL3 132 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 SENP7Q9BQF6 1050 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 QRSL1Q9H0R6 528 aaKnown RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 TMEM60Q9H2L4 133 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 NGRNQ9NPE2 291 aaKnown RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 KCNH7Q9NS40 1196 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 TUBD1Q9UJT1 453 aa8.56□□□□□ -1.04
SPIDR-215ENST00000521798 LAS1LQ9Y4W2 734 aaKnown RBP8.56□□□□□ -1.04
SPIDR-215ENST00000521798 WASH4PA8MWX3 477 aa8.55□□□□□ -1.04
SPIDR-215ENST00000521798 H3BML4 177 aa8.55□□□□□ -1.04
SPIDR-215ENST00000521798 PIP5K1CO60331 668 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms