RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
VPS37A-204ENST00000519381 C2CD4DB7Z1M9 353 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 ASAP2O43150 1006 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 ZNF623O75123 536 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 OFD1O75665 1012 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 SSBP05455 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
VPS37A-204ENST00000519381 WEE2P0C1S8 567 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 KLRC2P26717 231 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 SLC11A1P49279 550 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 LAMTOR4Q0VGL1 99 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 SCRN1Q12765 414 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 TFDP1Q14186 410 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 EPHA7Q15375 998 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 NPY5RQ15761 445 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 KIAA1841Q6NSI8 718 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 RNF149Q8NC42 400 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 CNNM3Q8NE01 707 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 TRIM6Q9C030 488 aaPredicted RBP17.72■□□□□ 0.43
VPS37A-204ENST00000519381 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 ZSWIM4Q9H7M6 989 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 SFXN1Q9H9B4 322 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 CDH22Q9UJ99 828 aa17.72■□□□□ 0.43
VPS37A-204ENST00000519381 ZDBF2Q9HCK1 2354 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 NR1I2O75469 434 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 URODP06132 367 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 EPCAMP16422 314 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 KRT2P35908 639 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 IER5LQ5T953 404 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 TMEM173Q86WV6 379 aaPredicted RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 C4orf19Q8IY42 314 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 C12orf76Q8N812 135 aaPredicted RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 ASIC4Q96FT7 647 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 DHX33Q9H6R0 707 aaKnown RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 IFT122Q9HBG6 1241 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
VPS37A-204ENST00000519381 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 IRAK3Q9Y616 596 aa17.71■□□□□ 0.43
VPS37A-204ENST00000519381 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 ALDH2P05091 517 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 ITGA4P13612 1032 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 VCPP55072 806 aaKnown RBP17.7■□□□□ 0.42
VPS37A-204ENST00000519381 TRIM29Q14134 588 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
VPS37A-204ENST00000519381 MXD4Q14582 209 aaPredicted RBP17.7■□□□□ 0.42
VPS37A-204ENST00000519381 NOTUMQ6P988 496 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 TMC5Q6UXY8 1006 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 CCDC149Q6ZUS6 474 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 TPH2Q8IWU9 490 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 DYDC2Q96IM9 177 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 RGL1Q9NZL6 768 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 SSX2IPQ9Y2D8 614 aa17.7■□□□□ 0.42
VPS37A-204ENST00000519381 INO80B-WBP1J3KQ70 363 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 C2CD2LO14523 706 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 POMCP01189 267 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 AVPR2P30518 371 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 AXLP30530 894 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 OR1G1P47890 313 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 PTPN14Q15678 1187 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 AGMOQ6ZNB7 445 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 FERMT3Q86UX7 667 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 BCL7CQ8WUZ0 217 aaPredicted RBP17.69■□□□□ 0.42
VPS37A-204ENST00000519381 ATOH1Q92858 354 aaPredicted RBP17.69■□□□□ 0.42
VPS37A-204ENST00000519381 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
VPS37A-204ENST00000519381 KMT2EQ8IZD2 1858 aa17.69■□□□□ 0.42
VPS37A-204ENST00000519381 PFKFB2O60825 505 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 AK2P54819 239 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
VPS37A-204ENST00000519381 CALCRLQ16602 461 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 OTOP3Q7RTS5 596 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 ZNF579Q8NAF0 562 aaKnown RBP17.68■□□□□ 0.42
VPS37A-204ENST00000519381 OXER1Q8TDS5 423 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 CCDC51Q96ER9 411 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 APOL6Q9BWW8 343 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 MINDY3Q9H8M7 445 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 WRAP73Q9P2S5 460 aaPredicted RBP17.68■□□□□ 0.42
VPS37A-204ENST00000519381 USTQ9Y2C2 406 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 ARID2Q68CP9 1835 aa17.68■□□□□ 0.42
VPS37A-204ENST00000519381 BRD1O95696 1058 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 ASGR2P07307 311 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 ADH1AP07327 375 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 NCLP19338 710 aaKnown RBP17.67■□□□□ 0.42
VPS37A-204ENST00000519381 MRPL10Q7Z7H8 261 aaKnown RBP17.67■□□□□ 0.42
VPS37A-204ENST00000519381 ZDHHC14Q8IZN3 488 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 SLC22A17Q8WUG5 538 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 HAS1Q92839 578 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 LIMD1Q9UGP4 676 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
VPS37A-204ENST00000519381 PCDHA12Q9UN75 941 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms