RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ATP8B2P98198 1209 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 FAM160A1Q05DH4 1040 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DMPKQ09013 629 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 ITIH4Q14624 930 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPCS2Q15005 226 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 LRRC14Q15048 493 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD1Q15327 319 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 FXNQ16595 210 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 GSTA3Q16772 222 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPDYCQ5MJ68 293 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 GALNT17Q6IS24 598 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 NEPROQ6NW34 567 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCNI2Q6ZMN8 369 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 RUFY4Q6ZNE9 571 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 SV2BQ7L1I2 683 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CROCCP2Q86T23 111 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DEPTORQ8TB45 409 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 MYCBPAPQ8TBZ2 947 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATRIPQ8WXE1 791 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CASP10Q92851 521 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 KCNN1Q92952 543 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DHX58Q96C10 678 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 EFHD2Q96C19 240 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCDC51Q96ER9 411 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 BCL2L13Q9BXK5 485 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PUS3Q9BZE2 481 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DHX36Q9H2U1 1008 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CNOT10Q9H9A5 744 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 SSU72Q9NP77 194 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PICK1Q9NRD5 415 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 RTEL1Q9NZ71 1219 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 THEGQ9P2T0 379 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 VTI1BQ9UEU0 232 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 HERC5Q9UII4 1024 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PCDHA4Q9UN74 947 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 MAPK8IP1Q9UQF2 711 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 BIVM-ERCC5R4GMW8 1640 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PTPRKQ15262 1439 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DENND4BO75064 1496 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 KIAA0232Q92628 1395 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ASXL1Q8IXJ9 1541 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 IQANK1A0A1B0GTG1 560 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD62A6NC57 917 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 C5orf60A6NFR6 353 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCT8L1PA6NM43 557 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 DBX1A6NMT0 343 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 E7EVH7 732 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 SORBS3O60504 671 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 FARP2O94887 1054 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CHGBP05060 677 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 PDGFRBP09619 1106 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 LMNB1P20700 586 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 STAT6P42226 847 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 EPHB4P54760 987 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 VSNL1P62760 191 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 BASP1P80723 227 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CDK17Q00537 523 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 DR1Q01658 176 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 COX10Q12887 443 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 LSAMPQ13449 338 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 BIRC3Q13489 604 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ITGA7Q13683 1181 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 SAFB2Q14151 953 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 BCL2A1Q16548 175 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CAMK4Q16566 473 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD20A2Q5SQ80 823 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 FKBP15Q5T1M5 1219 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD20A1Q5TYW2 823 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANGEL2Q5VTE6 544 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANKRD20A3Q5VUR7 823 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 TBC1D9BQ66K14 1250 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 TTBK2Q6IQ55 1244 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ARMCX5Q6P1M9 558 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMEM154Q6P9G4 183 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLC23A3Q6PIS1 610 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ARHGAP27Q6ZUM4 889 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMC4Q7Z404 712 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPP1R42Q7Z4L9 355 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 RAB11FIP4Q86YS3 637 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 MAP7D3Q8IWC1 876 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLC15A3Q8IY34 581 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CKAP2LQ8IYA6 745 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CRACR2BQ8N4Y2 399 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 EIF1ADQ8N9N8 165 aaKnown RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 FLAD1Q8NFF5 587 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 GABPB2Q8TAK5 448 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATP8B4Q8TF62 1192 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 GIPC2Q8TF65 315 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CENPTQ96BT3 561 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 CYFIP2Q96F07 1278 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 VPS50Q96JG6 964 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 NEK1Q96PY6 1258 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 PANX2Q96RD6 677 aa5.2□□□□□ -1.58
HMGB1P19-201ENST00000517578 HAUS7Q99871 368 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms