RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TNIP3Q96KP6 325 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 CREB3O43889 395 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 ARL4CP56559 192 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
TRIM41-207ENST00000515223 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
TRIM41-207ENST00000515223 PVALEFA0A1B0GWK0 134 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 RASGRF2O14827 1237 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 LZICQ8WZA0 190 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 SLC9A2Q9UBY0 812 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 NCK2O43639 380 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 GRM4Q14833 912 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 ALS2CLQ60I27 953 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 KIF12Q96FN5 646 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 HEY1Q9Y5J3 304 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 E5RI56 91 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 PRCPP42785 496 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 SLCO1A2P46721 670 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 GTF3C2Q8WUA4 911 aaPredicted RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 FMO2Q99518 471 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 GLE1Q53GS7 698 aaKnown RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 CPDO75976 1380 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 MOCS2O96007 188 aaPredicted RBP17.05■□□□□ 0.32
TRIM41-207ENST00000515223 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 ITPRIPL1Q6GPH6 555 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 RAD54LQ92698 747 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 STK36Q9NRP7 1315 aa17.05■□□□□ 0.32
TRIM41-207ENST00000515223 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 KCNA4P22459 653 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 DCAF4L1Q3SXM0 396 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 RAB42Q8N4Z0 105 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 SH3TC2Q8TF17 1288 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 CTNND1O60716 968 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 KRT38O76015 456 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 HSPA4LO95757 839 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 ARHGDIAP52565 204 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 G3BP2Q9UN86 482 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 PLAAQ9Y263 795 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 SNAP23O00161 211 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 PODXLO00592 558 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 STAT5BP51692 787 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 GPC5P78333 572 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 TJP2Q9UDY2 1190 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 LSM7Q9UK45 103 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 PLS3P13797 630 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 VAMP7P51809 220 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 EIF3BP55884 814 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 IMPG1Q17R60 797 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 NFRKBQ6P4R8 1299 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 MMS22LQ6ZRQ5 1243 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 LDHDQ86WU2 507 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 LXNQ9BS40 222 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 FUCA2Q9BTY2 467 aa17.04■□□□□ 0.32
TRIM41-207ENST00000515223 CNOT10Q9H9A5 744 aaKnown RBP17.04■□□□□ 0.32
TRIM41-207ENST00000515223 ESYT3A0FGR9 886 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 E9PMD0 336 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 PSMC1P62191 440 aaKnown RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 KIF19Q2TAC6 998 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 PDCD7Q8N8D1 485 aaKnown RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 MRPL46Q9H2W6 279 aaKnown RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CPVLQ9H3G5 476 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CCDC188H7C350 402 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ST8SIA6P61647 398 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 LPAR1Q92633 364 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 SUDS3Q9H7L9 328 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 PIN4Q9Y237 131 aaKnown RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CHD1O14646 1710 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 KRT7P08729 469 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ADORA2BP29275 332 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 CHRNA5P30532 468 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 ENOSF1Q7L5Y1 443 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 C11orf70Q9BRQ4 267 aa17.03■□□□□ 0.32
TRIM41-207ENST00000515223 GPBP1L1Q9HC44 474 aaPredicted RBP17.03■□□□□ 0.32
TRIM41-207ENST00000515223 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms