RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 ARL2P36404 184 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 PTENP60484 403 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 ECM1Q16610 540 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 AMHR2Q16671 573 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 CSPP1Q1MSJ5 1256 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 AGMOQ6ZNB7 445 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
CDK7-208ENST00000512687 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
CDK7-208ENST00000512687 POLR3FQ9H1D9 316 aaPredicted RBP13.38□□□□□ -0.27
CDK7-208ENST00000512687 EPHX3Q9H6B9 360 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 TUFT1Q9NNX1 390 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 TBC1D13Q9NVG8 400 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 BARX2Q9UMQ3 279 aaPredicted RBP13.38□□□□□ -0.27
CDK7-208ENST00000512687 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 PCDHB2Q9Y5E7 798 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 CITO14578 2027 aa13.38□□□□□ -0.27
CDK7-208ENST00000512687 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 ASAP2O43150 1006 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 OFD1O75665 1012 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 NDUFV1P49821 464 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 RAB27AP51159 221 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 AFF1P51825 1210 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 BCAR1P56945 870 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 MBTD1Q05BQ5 628 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 DUSP6Q16828 381 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 SMG8Q8ND04 991 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 TCF25Q9BQ70 676 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
CDK7-208ENST00000512687 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
CDK7-208ENST00000512687 B4GALT5O43286 388 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDK7-208ENST00000512687 SKIP12755 728 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 RPA1P27694 616 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 TIE1P35590 1138 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 PPM1AP35813 382 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 ZP2Q05996 745 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 SMAD4Q13485 552 aaKnown RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 KCNC3Q14003 757 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 MXD4Q14582 209 aaPredicted RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 SMAD2Q15796 467 aaKnown RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 MICAL1Q8TDZ2 1067 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 TLE6Q9H808 572 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
CDK7-208ENST00000512687 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
CDK7-208ENST00000512687 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 ST18O60284 1047 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 DDHD2O94830 711 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 ERLIN2O94905 339 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 EYA4O95677 639 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 XRCC6P12956 609 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDK7-208ENST00000512687 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
CDK7-208ENST00000512687 SLC11A1P49279 550 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 TFDP1Q14186 410 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 IL17AQ16552 155 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
CDK7-208ENST00000512687 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 GJD3Q8N144 294 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 VN1R3Q9BXE9 311 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 RSAD1Q9HA92 442 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 RAPGEFL1Q9UHV5 662 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
CDK7-208ENST00000512687 HES2Q9Y543 173 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 IPPQ9Y573 584 aa13.35□□□□□ -0.27
CDK7-208ENST00000512687 PP2D1A8MPX8 630 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 EDN1P05305 212 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 GALTP07902 379 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 ARF4P18085 180 aaPredicted RBP13.34□□□□□ -0.27
CDK7-208ENST00000512687 GJB2P29033 226 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 SSTR3P32745 418 aaPredicted RBP13.34□□□□□ -0.27
CDK7-208ENST00000512687 COASYQ13057 564 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 PTGDRQ13258 359 aa13.34□□□□□ -0.27
CDK7-208ENST00000512687 PDE12Q6L8Q7 609 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms