RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 TRAIPQ9BWF2 469 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 TNMDQ9H2S6 317 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 ZNF576Q9H609 170 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 CDHR5Q9HBB8 845 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 IFT122Q9HBG6 1241 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 XPNPEP1Q9NQW7 623 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 AGPAT5Q9NUQ2 364 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 KANSL3Q9P2N6 904 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 STK39Q9UEW8 545 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 EXOC7Q9UPT5 735 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-231ENST00000512340 CNTNAP2Q9UHC6 1331 aa8.23□□□□□ -1.09
NR1I3-231ENST00000512340 TTC3P53804 2025 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MICAL3Q7RTP6 2002 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 C9IYK1 514 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ACKR2O00590 384 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PRKCBP05771 671 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MYL1P05976 194 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 RB1P06400 928 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 CA3P07451 260 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 IDEP14735 1019 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 CMA1P23946 247 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MATR3P43243 847 aaKnown RBP eCLIP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 SLC12A3P55017 1021 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 FAM189BP81408 668 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 RNASELQ05823 741 aaKnown RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ALCAMQ13740 583 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MCM6Q14566 821 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ECM1Q16610 540 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PTPROQ16827 1216 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 FAM187BQ17R55 369 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 DCAF4L1Q3SXM0 396 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 NAALADL2Q58DX5 795 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 SPECC1Q5M775 1068 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 CDCA2Q69YH5 1023 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 SLC27A1Q6PCB7 646 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ECHDC2Q86YB7 292 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 FAM178BQ8IXR5 827 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PDILTQ8N807 584 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ASAP3Q8TDY4 903 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 LEO1Q8WVC0 666 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 BICD1Q96G01 975 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 TCHPQ9BT92 498 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 C11orf84Q9BUA3 381 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 MRPL4Q9BYD3 311 aaKnown RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 TMEM117Q9H0C3 514 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 NKX2-4Q9H2Z4 354 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 SEMA6BQ9H3T3 888 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 GPRC5CQ9NQ84 441 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 FAM105AQ9NUU6 356 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PUF60Q9UHX1 559 aaKnown RBP8.22□□□□□ -1.09
NR1I3-231ENST00000512340 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 ADGRA3Q8IWK6 1321 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 EYSQ5T1H1 3165 aa8.22□□□□□ -1.09
NR1I3-231ENST00000512340 A0A1W2PQ27 194 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 A0A1W2PQ64 194 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 A0A1W2PQD8 194 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 TBKBP1A7MCY6 615 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 GRXCR1A8MXD5 290 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 ZNF623O75123 536 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 DGKIO75912 1065 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 KIF20AO95235 890 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 MAPTP10636 758 aaKnown RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 ITGA4P13612 1032 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 FOSL2P15408 326 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 LAG3P18627 525 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 PPM1AP35813 382 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 SYKP43405 635 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 NPTX2P47972 431 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 RABGGTBP53611 331 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 YARSP54577 528 aaKnown RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 HTRA4P83105 476 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 KRT17Q04695 432 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 MBTD1Q05BQ5 628 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 RAD51AP2Q09MP3 1159 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 PKP1Q13835 747 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 DSC3Q14574 896 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 RESP18Q5W5W9 173 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 LRRC43Q8N309 656 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 FBXO22Q8NEZ5 403 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 DDX12PQ92771 950 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 DHX58Q96C10 678 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 HVCN1Q96D96 273 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 RPS6KC1Q96S38 1066 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 NTPCRQ9BSD7 190 aaKnown RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 RUSC1Q9BVN2 902 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 CCDC94Q9BW85 323 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-231ENST00000512340 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
NR1I3-231ENST00000512340 PANK2Q9BZ23 570 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms