RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 RIT2Q99578 217 aa10.59□□□□□ -0.71
SNF8-211ENST00000512243 FTOQ9C0B1 505 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNF8-211ENST00000512243 UPF3AQ9H1J1 476 aaKnown RBP10.59□□□□□ -0.71
SNF8-211ENST00000512243 CLIC4Q9Y696 253 aa10.59□□□□□ -0.71
SNF8-211ENST00000512243 ELP1O95163 1332 aa10.58□□□□□ -0.71
SNF8-211ENST00000512243 CHMP2AO43633 222 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 ZEB2O60315 1214 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 PSMD10O75832 226 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 YEATS4O95619 227 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 PGK1P00558 417 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 MMP3P08254 477 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 C6orf222P0C671 652 aaPredicted RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 PTGS1P23219 599 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 PRPHP41219 470 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 TXKP42681 527 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 NASPP49321 788 aaPredicted RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 DNM1Q05193 864 aaKnown RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 ZNF746Q6NUN9 644 aaPredicted RBP10.58□□□□□ -0.72
SNF8-211ENST00000512243 RNF180Q86T96 592 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 AFG1LQ8WV93 481 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 GJA10Q969M2 543 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 PLD4Q96BZ4 506 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 MTMR9Q96QG7 549 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 RAB34Q9BZG1 259 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 UNC45AQ9H3U1 944 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 TPSG1Q9NRR2 321 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 ARID2Q68CP9 1835 aa10.58□□□□□ -0.72
SNF8-211ENST00000512243 WDR64B1ANS9 1081 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 DHX15O43143 795 aaKnown RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 ADAMTS4O75173 837 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 GHRHP01286 108 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 GJB1P08034 283 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 SFNP31947 248 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 JAK3P52333 1124 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 ACTR2P61160 394 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 BEX3Q00994 111 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 PPP2R5CQ13362 524 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 PTPAQ15257 358 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 LRRC41Q15345 812 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 DGKDQ16760 1214 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 ARL6IP4Q66PJ3 421 aaKnown RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 NCAPH2Q6IBW4 605 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 DTHD1Q6ZMT9 781 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 MIER3Q7Z3K6 550 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 ATCAYQ86WG3 371 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 SMAP1Q8IYB5 467 aaPredicted RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 C4orf32Q8N8J7 132 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 ARRDC4Q8NCT1 418 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 RDM1Q8NG50 284 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 KCNG4Q8TDN1 519 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 TTC12Q9H892 705 aaPredicted RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 VAV3Q9UKW4 847 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
SNF8-211ENST00000512243 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 TRIP12Q14669 1992 aaPredicted RBP10.57□□□□□ -0.72
SNF8-211ENST00000512243 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 VWA3AA6NCI4 1184 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 MYADML2A6NDP7 307 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 C9orf172C9J069 976 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 SPTLC2O15270 562 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 TFRCP02786 760 aaKnown RBP10.56□□□□□ -0.72
SNF8-211ENST00000512243 MYL3P08590 195 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 SUPT20HL2P0C7V6 817 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 CAPN2P17655 700 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 MARCKSP29966 332 aaPredicted RBP10.56□□□□□ -0.72
SNF8-211ENST00000512243 SOX18P35713 384 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 TECP42680 631 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 NKX3-2P78367 333 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 MBTPS1Q14703 1052 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 HSDL1Q3SXM5 330 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 GDF6Q6KF10 455 aaPredicted RBP10.56□□□□□ -0.72
SNF8-211ENST00000512243 MIS18BP1Q6P0N0 1132 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
SNF8-211ENST00000512243 LINC00301Q8NCQ3 95 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 KLHDC9Q8NEP7 349 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 ERMNQ8TAM6 284 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 U2AF1L4Q8WU68 220 aaKnown RBP10.56□□□□□ -0.72
SNF8-211ENST00000512243 SEPT1Q8WYJ6 367 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 SPATA32Q96LK8 384 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 GPR20Q99678 358 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 SEMA6BQ9H3T3 888 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 BCAS3Q9H6U6 928 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 OGDHLQ9ULD0 1010 aa10.56□□□□□ -0.72
SNF8-211ENST00000512243 DNAH12Q6ZR08 3092 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 DNM1LO00429 736 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 CTAGE5O15320 804 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 KPNA6O60684 536 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 PPP6R2O75170 966 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 SGPL1O95470 568 aa10.55□□□□□ -0.72
SNF8-211ENST00000512243 CCNE2O96020 404 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms