RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 EDARQ9UNE0 448 aa7.84□□□□□ -1.15
CDH9-202ENST00000505020 TCRBV16S1A1N1A0A5B0 115 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 BLACEA4D250 179 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 CTAGE9A4FU28 777 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 RGSL1A5PLK6 1076 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 DDX3XO00571 662 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDH9-202ENST00000505020 IKBKBO14920 756 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 B3GALT2O43825 422 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ERAL1O75616 437 aaKnown RBP7.83□□□□□ -1.16
CDH9-202ENST00000505020 GJB3O75712 270 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 IL2RAP01589 272 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 GSNP06396 782 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SNRPA1P09661 255 aaKnown RBP7.83□□□□□ -1.16
CDH9-202ENST00000505020 BEX3Q00994 111 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 RELQ04864 619 aaPredicted RBP7.83□□□□□ -1.16
CDH9-202ENST00000505020 BFSP1Q12934 665 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 MAPK7Q13164 816 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TRPC3Q13507 836 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TSTQ16762 297 aaKnown RBP7.83□□□□□ -1.16
CDH9-202ENST00000505020 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SUPT20HL1Q3ZLR7 823 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 CCDC152Q4G0S7 254 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 NPNTQ6UXI9 565 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TRIM74Q86UV6 250 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TRIM73Q86UV7 250 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 CCDC65Q8IXS2 484 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TMCO5AQ8N6Q1 288 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TSPYL6Q8N831 410 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ZNF511Q8NB15 262 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TTLL11Q8NHH1 800 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 HERVK_113Q902F9 699 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 HSPH1Q92598 858 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 PHKBQ93100 1093 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 TMEM169Q96HH4 297 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 DACH2Q96NX9 599 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ORAI3Q9BRQ5 295 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 LRRCC1Q9C099 1032 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SEMA4AQ9H3S1 761 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ATP13A1Q9HD20 1204 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SEC31BQ9NQW1 1179 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SALL4Q9UJQ4 1053 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 SNX8Q9Y5X2 465 aa7.83□□□□□ -1.16
CDH9-202ENST00000505020 ARHGAP10A1A4S6 786 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PRPSAP2O60256 369 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 KERAO60938 352 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 EFCAB14O75071 495 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZNF254O75437 659 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 UBXN7O94888 489 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 KCNH1O95259 989 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PDHBP11177 359 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 LAG3P18627 525 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 SMAD2Q15796 467 aaKnown RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 CNGA3Q16281 694 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PFKFB4Q16877 469 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ALG11Q2TAA5 492 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZACNQ401N2 412 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ARHGAP11AQ6P4F7 1023 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ANKLE2Q86XL3 938 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PLD6Q8N2A8 252 aaKnown RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 LINC00469Q8N7U9 141 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 CEP70Q8NHQ1 597 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 GRIN3AQ8TCU5 1115 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 RNF139Q8WU17 664 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 LRTOMTQ8WZ04 291 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 CDCA5Q96FF9 252 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 TCF12Q99081 682 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PYM1Q9BRP8 204 aaKnown RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZBED2Q9BTP6 218 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZCWPW1Q9H0M4 648 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 CRLF2Q9HC73 371 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 RXFP3Q9NSD7 469 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 COQ3Q9NZJ6 369 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ATP23Q9Y6H3 246 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 MEIS3P2A8K0S8 358 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 H3BML4 177 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ACKR2O00590 384 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 FGF18O76093 207 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZSCAN22P10073 491 aaPredicted RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 MAPK4P31152 587 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 ETV1P50549 477 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 TLE2Q04725 743 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 LRMPQ12912 555 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 COASYQ13057 564 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PLS1Q14651 629 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 CNN3Q15417 329 aaKnown RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 DENND1CQ8IV53 801 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 RPAP2Q8IXW5 612 aaPredicted RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 ZNF295-AS1Q8N0V1 137 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PDCL2Q8N4E4 241 aa7.82□□□□□ -1.16
CDH9-202ENST00000505020 PCSK9Q8NBP7 692 aaKnown RBP7.82□□□□□ -1.16
CDH9-202ENST00000505020 Q8NFD4 153 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms