RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SESTD1Q86VW0 696 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 RHPN2Q8IUC4 686 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SPC24Q8NBT2 197 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 GOLGA5Q8TBA6 731 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 WNT8BQ93098 351 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 ZNF668Q96K58 619 aaPredicted RBP11.39□□□□□ -0.59
TPM3-217ENST00000504663 MKNK1Q9BUB5 465 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 VPS16Q9H269 839 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 ADAMTS10Q9H324 1103 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 PTPRHQ9HD43 1115 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 CGNQ9P2M7 1197 aaKnown RBP11.39□□□□□ -0.59
TPM3-217ENST00000504663 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 PTPN22Q9Y2R2 807 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 A0A1W2PQC6 194 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 H0YCG3 227 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 CETN3O15182 167 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 TREHO43280 583 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 KPNA6O60684 536 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 GNA14O95837 355 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 VTNP04004 478 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 ASGR1P07306 291 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 HSPA8P11142 646 aaKnown RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 CDK11BP21127 795 aaKnown RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 SCP2P22307 547 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 CNGA1P29973 690 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 KLK7P49862 253 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 WNT7BP56706 349 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 VWA3BQ502W6 1294 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 ARMCX5Q6P1M9 558 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 TMC6Q7Z403 805 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 FAM114A1Q8IWE2 563 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 DEPTORQ8TB45 409 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 SH3TC2Q8TF17 1288 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 ZBTB45Q96K62 511 aaPredicted RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 ERGIC2Q96RQ1 377 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 KATNAL1Q9BW62 490 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 TARS2Q9BW92 718 aaKnown RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 PAK6Q9NQU5 681 aaPredicted RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.38□□□□□ -0.59
TPM3-217ENST00000504663 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
TPM3-217ENST00000504663 A0A087WZ62 844 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 N4BP3O15049 544 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 MAPK13O15264 365 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 ASAP2O43150 1006 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 B4GALT5O43286 388 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 FGFR1OPO95684 399 aaKnown RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 PRKCBP05771 671 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 SRGAP2CP0DJJ0 459 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 GARTP22102 1010 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 CYP2J2P51589 502 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 KCNMA1Q12791 1236 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 KCNA10Q16322 511 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 FAM187BQ17R55 369 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 ZBTB41Q5SVQ8 909 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 GDF6Q6KF10 455 aaPredicted RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 ZPBP2Q6X784 338 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 METTL13Q8N6R0 699 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 RETREG2Q8NC44 543 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 ACO2Q99798 780 aaKnown RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 FDXACB1Q9BRP7 624 aaPredicted RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM3-217ENST00000504663 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 NDST4Q9H3R1 872 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 PCIF1Q9H4Z3 704 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
TPM3-217ENST00000504663 PDCD11Q14690 1871 aaKnown RBP11.37□□□□□ -0.59
TPM3-217ENST00000504663 CNTNAP2Q9UHC6 1331 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 A0A0B4J269 797 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 HNRNPDLO14979 420 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 EPHB6O15197 1021 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 GYPCP04921 128 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 CYP2C9P11712 490 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 RPL13P26373 211 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 ABCD1P33897 745 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 PSMC2P35998 433 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 MTIF2P46199 727 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 EFNA5P52803 228 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 DLG4P78352 724 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 GOLGA8FQ08AF8 430 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 GOLGA8DPQ0D2H9 430 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms