RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CCNA1P78396 465 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 PTPN21Q16825 1174 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 ASTE1Q2TB18 679 aaPredicted RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 NOL9Q5SY16 702 aaKnown RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 GPD1LQ8N335 351 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 C1orf131Q8NDD1 294 aaKnown RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 HPS3Q969F9 1004 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CAVIN3Q969G5 261 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 CCDC77Q9BR77 488 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 RAVER2Q9HCJ3 691 aaKnown RBP7.99□□□□□ -1.13
PDGFC-203ENST00000502773 GOLGA6AQ9NYA3 693 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 DONSONQ9NYP3 566 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 USP20Q9Y2K6 914 aa7.99□□□□□ -1.13
PDGFC-203ENST00000502773 MYH4Q9Y623 1939 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 ASAP2O43150 1006 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 AKAP3O75969 853 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 TBC1D8O95759 1140 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SLC26A2P50443 739 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 HADHBP55084 474 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 B4GALNT4Q76KP1 1039 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 ARMC9Q7Z3E5 817 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 POMGNT1Q8WZA1 660 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 AGPAT1Q99943 283 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 IRX2Q9BZI1 471 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 JPH1Q9HDC5 661 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 TTC7AQ9ULT0 858 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 REXO2Q9Y3B8 237 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 ZHX2Q9Y6X8 837 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 PPP1R12AO14974 1030 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 P4HA1P13674 534 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 RARRES1P49788 294 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 CAV1Q03135 178 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 TAP1Q03518 808 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SPP2Q13103 211 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 PGM5Q15124 567 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 TCEAL1Q15170 157 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SNRNP48Q6IEG0 339 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 FASTKD5Q7L8L6 764 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 FBXL13Q8NEE6 735 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SCLT1Q96NL6 688 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 ANKZF1Q9H8Y5 726 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 BCS1LQ9Y276 419 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 NPHP3-ACAD11A0A0J9YXS1 232 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 HMGB1P1B2RPK0 211 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 DDX39AO00148 427 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 VWA5AO00534 786 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 EIF2AK2P19525 551 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 NMT1P30419 496 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 RPS6P62753 249 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 KIF22Q14807 665 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 ECM1Q16610 540 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 VSIG10LQ86VR7 867 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 MMS19Q96T76 1030 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 FAM124BQ9H5Z6 455 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 UBE2TQ9NPD8 197 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 PNMA3Q9UL41 463 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 G3BP2Q9UN86 482 aaKnown RBP7.98□□□□□ -1.13
PDGFC-203ENST00000502773 SCINQ9Y6U3 715 aa7.98□□□□□ -1.13
PDGFC-203ENST00000502773 BUB1O43683 1085 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 ARP10275 920 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 LIG3P49916 1009 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 SNAP25P60880 206 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 IFFO1Q0D2I5 559 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 CALCOCO2Q13137 446 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 BIRC3Q13489 604 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 C11orf63Q6NUN7 778 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 WRNIP1Q96S55 665 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 TRIM6Q9C030 488 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 ZNF112Q9UJU3 913 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 ASTN1O14525 1302 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 UNCXA6NJT0 531 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 HNRNPDLO14979 420 aaKnown RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 ADAMTS3O15072 1205 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 VCAM1P19320 739 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 CHRNA3P32297 505 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 NCKAP1LP55160 1127 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 PEX3P56589 373 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 WDR78Q5VTH9 848 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 N4BP2L2Q92802 583 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 FAXDC2Q96IV6 333 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 NTPCRQ9BSD7 190 aaKnown RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 TBX20Q9UMR3 447 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 GREB1LQ9C091 1923 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 SRRM3A6NNA2 597 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-203ENST00000502773 EML1O00423 815 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 EBAG9O00559 213 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 CXCL11O14625 94 aa7.97□□□□□ -1.13
PDGFC-203ENST00000502773 SPOPO43791 374 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms