RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 NME8Q8N427 588 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 EEF2KMTQ96G04 330 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 ABHD8Q96I13 439 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 NLRP4Q96MN2 994 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 NAP1L5Q96NT1 182 aaPredicted RBP8□□□□□ -1.13
GPATCH4-208ENST00000497287 TUBGCP2Q9BSJ2 902 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 NOC4LQ9BVI4 516 aaKnown RBP8□□□□□ -1.13
GPATCH4-208ENST00000497287 MRPL4Q9BYD3 311 aaKnown RBP8□□□□□ -1.13
GPATCH4-208ENST00000497287 MCOLN1Q9GZU1 580 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 XRN2Q9H0D6 950 aaKnown RBP eCLIP8□□□□□ -1.13
GPATCH4-208ENST00000497287 VPS16Q9H269 839 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
GPATCH4-208ENST00000497287 TAB2Q9NYJ8 693 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 HDAC6Q9UBN7 1215 aa8□□□□□ -1.13
GPATCH4-208ENST00000497287 ARMCX3Q9UH62 379 aaPredicted RBP8□□□□□ -1.13
GPATCH4-208ENST00000497287 SCN10AQ9Y5Y9 1956 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 CCDC85CA6NKD9 419 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 LGALS16A8MUM7 142 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 KBTBD13C9JR72 458 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 ANKRD63C9JTQ0 380 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 INO80B-WBP1J3KQ70 363 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 MAPK13O15264 365 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 EXOC3O60645 756 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 VTNP04004 478 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 HOXC8P31273 242 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 GPC3P51654 580 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 ADAM17P78536 824 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 UBXN1Q04323 297 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 FKBP15Q5T1M5 1219 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 LHX8Q68G74 356 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 TAF2Q6P1X5 1199 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 ZPBP2Q6X784 338 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 TAS1R3Q7RTX0 852 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 CTU1Q7Z7A3 348 aaKnown RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 RSPH3Q86UC2 560 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SESTD1Q86VW0 696 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 IFNLR1Q8IU57 520 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 VSTM4Q8IW00 320 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 FAM186BQ8IYM0 893 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 XXYLT1Q8NBI6 393 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SPC24Q8NBT2 197 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SH3TC2Q8TF17 1288 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 POMGNT1Q8WZA1 660 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 ZBTB10Q96DT7 871 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 GLT1D1Q96MS3 346 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SCLT1Q96NL6 688 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 SEZ6LQ9BYH1 1024 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 GCOM2Q9BZD3 368 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 INO80BQ9C086 356 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 CCDC113Q9H0I3 377 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 FAM49AQ9H0Q0 323 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 FZD8Q9H461 694 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 PCIF1Q9H4Z3 704 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 KIAA1586Q9HCI6 787 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 PRMT7Q9NVM4 692 aaPredicted RBP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 HSPBP1Q9NZL4 362 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 IMPACTQ9P2X3 320 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 GTF2IRD1Q9UHL9 959 aa7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.99□□□□□ -1.13
GPATCH4-208ENST00000497287 CENPFP49454 3210 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 A0A087WZ62 844 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 M0QZ92 97 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 ACKR2O00590 384 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TEX33O43247 280 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TREHO43280 583 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 AKAP3O75969 853 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 LDHAP00338 332 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 GJB1P08034 283 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TPM1P09493 284 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 KRT13P13646 458 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 MATR3P43243 847 aaKnown RBP eCLIP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 CASP4P49662 377 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 ACLYP53396 1101 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 NLRP11P59045 1033 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 MBTD1Q05BQ5 628 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 NCBP1Q09161 790 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 PRPF4BQ13523 1007 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 PCBP1Q15365 356 aaKnown RBP eCLIP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 PKN2Q16513 984 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 FAM187BQ17R55 369 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 FAM47CQ5HY64 1035 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 RUFY4Q6ZNE9 571 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 INTS8Q75QN2 995 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TMC6Q7Z403 805 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 USP37Q86T82 979 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 DNAJB3Q8WWF6 145 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 TRIM44Q96DX7 344 aaPredicted RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 PRIMPOLQ96LW4 560 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 ACO2Q99798 780 aaKnown RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 FDXACB1Q9BRP7 624 aaPredicted RBP7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 CBWD1Q9BRT8 395 aa7.98□□□□□ -1.13
GPATCH4-208ENST00000497287 UNC93B1Q9H1C4 597 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms