RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 FRMD4BQ9Y2L6 1034 aa18.47■□□□□ 0.55
LMNA-216ENST00000496738 TRIM17Q9Y577 477 aa18.47■□□□□ 0.55
LMNA-216ENST00000496738 HTTP42858 3142 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 TTLL13PA6NNM8 815 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 LIG4P49917 911 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 ZNF200P98182 395 aaPredicted RBP18.46■□□□□ 0.55
LMNA-216ENST00000496738 SYCP1Q15431 976 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 FKBP15Q5T1M5 1219 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 NFRKBQ6P4R8 1299 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 FRMD5Q7Z6J6 570 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 LINC01465Q8N7H1 131 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 PCMTD1Q96MG8 357 aaPredicted RBP18.46■□□□□ 0.55
LMNA-216ENST00000496738 SPC25Q9HBM1 224 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 KCNG1Q9UIX4 513 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 PHLPP2Q6ZVD8 1323 aa18.46■□□□□ 0.55
LMNA-216ENST00000496738 HAS3O00219 553 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 CSDE1O75534 798 aaKnown RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 HSPA6P17066 643 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 TMEM62Q0P6H9 643 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 POMGNT1Q8WZA1 660 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 TARS2Q9BW92 718 aaKnown RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 PTCH2Q9Y6C5 1203 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 SIP14410 1827 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 GNRH1P01148 92 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 INHAP05111 366 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 ADKP55263 362 aaKnown RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 TFDP1Q14186 410 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 SLC9A9Q8IVB4 645 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 ZBTB8OSQ8IWT0 167 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 UPF3AQ9H1J1 476 aaKnown RBP18.45■□□□□ 0.54
LMNA-216ENST00000496738 MMRN2Q9H8L6 949 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 HDAC6Q9UBN7 1215 aa18.45■□□□□ 0.54
LMNA-216ENST00000496738 A0A087WZ62 844 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 ADAMTS4O75173 837 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 TMOD1P28289 359 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
LMNA-216ENST00000496738 RBL2Q08999 1139 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 MAP3K21Q5TCX8 1036 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 CDCA2Q69YH5 1023 aaPredicted RBP18.44■□□□□ 0.54
LMNA-216ENST00000496738 RUFY4Q6ZNE9 571 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 XXYLT1Q8NBI6 393 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 PXYLP1Q8TE99 480 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 ZBTB45Q96K62 511 aaPredicted RBP18.44■□□□□ 0.54
LMNA-216ENST00000496738 FDXACB1Q9BRP7 624 aaPredicted RBP18.44■□□□□ 0.54
LMNA-216ENST00000496738 MINDY3Q9H8M7 445 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 RRN3P2A6NIE6 340 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 INO80B-WBP1J3KQ70 363 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 TRIM49P0CI25 452 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 TRIM49CP0CI26 452 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
LMNA-216ENST00000496738 KCNH2Q12809 1159 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 BORCS6Q96GS4 357 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 SCLT1Q96NL6 688 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 KATNAL1Q9BW62 490 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 INO80BQ9C086 356 aaPredicted RBP18.44■□□□□ 0.54
LMNA-216ENST00000496738 CCDC113Q9H0I3 377 aa18.44■□□□□ 0.54
LMNA-216ENST00000496738 GYPCP04921 128 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 PRKCBP05771 671 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 HARSP12081 509 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 MSNP26038 577 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 GSDMDP57764 484 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 PPFIBP1Q86W92 1011 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 CBWD2Q8IUF1 395 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 C12orf56Q8IXR9 622 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 KIAA0319LQ8IZA0 1049 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 C7orf31Q8N865 590 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 NLRP7Q8WX94 980 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 TMEM134Q9H6X4 195 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 METTL14Q9HCE5 456 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 DDX20Q9UHI6 824 aaKnown RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 GINS2Q9Y248 185 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 TREHO43280 583 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 MYCP01106 439 aaPredicted RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 ADRB2P07550 413 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 CYP2C9P11712 490 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.54
LMNA-216ENST00000496738 CASP14P31944 242 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 GRK4P32298 578 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 EFNA5P52803 228 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 ARHGEF6Q15052 776 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 SH3TC2Q8TF17 1288 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 SLC35C1Q96A29 364 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 MTG1Q9BT17 334 aaPredicted RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 MKNK1Q9BUB5 465 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
LMNA-216ENST00000496738 ITIH6Q6UXX5 1313 aa18.43■□□□□ 0.54
LMNA-216ENST00000496738 RNF225M0QZC1 329 aaPredicted RBP18.42■□□□□ 0.54
LMNA-216ENST00000496738 B4GALT5O43286 388 aa18.42■□□□□ 0.54
LMNA-216ENST00000496738 MSCO60682 206 aa18.42■□□□□ 0.54
LMNA-216ENST00000496738 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■■■□ 19.8
LMNA-216ENST00000496738 DLG4P78352 724 aa18.42■□□□□ 0.54
LMNA-216ENST00000496738 KCNA10Q16322 511 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms