RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 DYDC2Q96IM9 177 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 MINDY3Q9H8M7 445 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 RSAD1Q9HA92 442 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 STK39Q9UEW8 545 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 CNTNAP2Q9UHC6 1331 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 WEE2P0C1S8 567 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 EPCAMP16422 314 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 AVPR2P30518 371 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 HOXA11P31270 313 aaPredicted RBP16.47■□□□□ 0.23
PTPN18-216ENST00000495400 EMC2Q15006 297 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 ATAT1Q5SQI0 421 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 UBXN11Q5T124 520 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 KIAA1841Q6NSI8 718 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 SLFN12Q8IYM2 578 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 KREMEN2Q8NCW0 462 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 WASF1Q92558 559 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 FAM193BQ96PV7 902 aaPredicted RBP16.47■□□□□ 0.23
PTPN18-216ENST00000495400 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 BMP2KQ9NSY1 1161 aaPredicted RBP16.47■□□□□ 0.23
PTPN18-216ENST00000495400 RGL1Q9NZL6 768 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
PTPN18-216ENST00000495400 SORCS3Q9UPU3 1222 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
PTPN18-216ENST00000495400 B4GALT3O60512 393 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 DTNBO60941 627 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 DDHD2O94830 711 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 ALDH2P05091 517 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
PTPN18-216ENST00000495400 VCPP55072 806 aaKnown RBP16.46■□□□□ 0.23
PTPN18-216ENST00000495400 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 TCF15Q12870 199 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 CTTNQ14247 550 aaKnown RBP16.46■□□□□ 0.23
PTPN18-216ENST00000495400 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 EARS2Q5JPH6 523 aaKnown RBP16.46■□□□□ 0.23
PTPN18-216ENST00000495400 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 UBALD2Q8IYN6 164 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 CNNM3Q8NE01 707 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 MTRQ99707 1265 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 FAN1Q9Y2M0 1017 aa16.46■□□□□ 0.23
PTPN18-216ENST00000495400 ZBTB39O15060 712 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 AXLP30530 894 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
PTPN18-216ENST00000495400 CYP4A11Q02928 519 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 CABP7Q86V35 215 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 TPH2Q8IWU9 490 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 ZDHHC14Q8IZN3 488 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 PLCD3Q8N3E9 789 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 TDRD5Q8NAT2 981 aaKnown RBP16.45■□□□□ 0.22
PTPN18-216ENST00000495400 KLHL5Q96PQ7 755 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 EMILIN2Q9BXX0 1053 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 UBN1Q9NPG3 1134 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
PTPN18-216ENST00000495400 DENND4AQ7Z401 1863 aa16.45■□□□□ 0.22
PTPN18-216ENST00000495400 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
PTPN18-216ENST00000495400 FAM205CA6NFA0 338 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 NRP1O14786 923 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 ERLIN2O94905 339 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 SLITRK3O94933 977 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 BRD1O95696 1058 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 PDGFBP01127 241 aaPredicted RBP16.44■□□□□ 0.22
PTPN18-216ENST00000495400 POMCP01189 267 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPN18-216ENST00000495400 ITGA4P13612 1032 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 KLRC2P26717 231 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 KRT2P35908 639 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 AK2P54819 239 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 PTENP60484 403 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 NR5A1Q13285 461 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 MXD4Q14582 209 aaPredicted RBP16.44■□□□□ 0.22
PTPN18-216ENST00000495400 PCBP1Q15365 356 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPN18-216ENST00000495400 SMG8Q8ND04 991 aaKnown RBP16.44■□□□□ 0.22
PTPN18-216ENST00000495400 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 XPNPEP1Q9NQW7 623 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 USTQ9Y2C2 406 aa16.44■□□□□ 0.22
PTPN18-216ENST00000495400 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 LILRB3O75022 631 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 LYPLA2O95372 231 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
PTPN18-216ENST00000495400 CLCN4P51793 760 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 NUBP1P53384 320 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 ANAPC15P60006 121 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 POU5F1BQ06416 359 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 NCBP1Q09161 790 aaKnown RBP16.43■□□□□ 0.22
PTPN18-216ENST00000495400 TFDP1Q14186 410 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 TMC5Q6UXY8 1006 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 GPR149Q86SP6 731 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms