RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RAB27AP51159 221 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 ITIH3Q06033 890 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 PPP2R5CQ13362 524 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 BMS1Q14692 1282 aaKnown RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 GALNT17Q6IS24 598 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 TMC5Q6UXY8 1006 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 NEK8Q86SG6 692 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 DDX53Q86TM3 631 aaKnown RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 URGCPQ8TCY9 931 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 PRPF31Q8WWY3 499 aaKnown RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 SLC7A3Q8WY07 619 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 DYDC2Q96IM9 177 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 NECTIN4Q96NY8 510 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 JPH2Q9BR39 696 aaPredicted RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 LXNQ9BS40 222 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 PHF20Q9BVI0 1012 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 RGL1Q9NZL6 768 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 CFAP54Q96N23 3096 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 DOCK6Q96HP0 2047 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 DDHD2O94830 711 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 P4HBP07237 508 aaKnown RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 MYBP10242 640 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 MTHFRP42898 656 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 FOSBP53539 338 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 LAMTOR4Q0VGL1 99 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 MTMR3Q13615 1198 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 EMC2Q15006 297 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 PTPN14Q15678 1187 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 XKR9Q5GH70 373 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 EARS2Q5JPH6 523 aaKnown RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 UBXN11Q5T124 520 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 KIAA1841Q6NSI8 718 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 TDRD5Q8NAT2 981 aaKnown RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 SLC22A17Q8WUG5 538 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 PSPC1Q8WXF1 523 aaKnown RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 HAS1Q92839 578 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 PGBD4Q96DM1 585 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 RIPOR3Q96MK2 946 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 TRAIPQ9BWF2 469 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 RSAD1Q9HA92 442 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 DZANK1Q9NVP4 752 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 LIMD1Q9UGP4 676 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 SORCS3Q9UPU3 1222 aa14.13□□□□□ -0.15
SKA1-205ENST00000494518 PRG3Q9Y2Y8 225 aaPredicted RBP14.13□□□□□ -0.15
SKA1-205ENST00000494518 MTCL1Q9Y4B5 1905 aaKnown RBP14.12□□□□□ -0.15
SKA1-205ENST00000494518 DOCK8Q8NF50 2099 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 C2CD2LO14523 706 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 ZNF623O75123 536 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 YWHABP31946 246 aaKnown RBP14.12□□□□□ -0.15
SKA1-205ENST00000494518 CABP7Q86V35 215 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 RNF149Q8NC42 400 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 CPB2Q96IY4 423 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 FAM20AQ96MK3 541 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 FAM193BQ96PV7 902 aaPredicted RBP14.12□□□□□ -0.15
SKA1-205ENST00000494518 DHX33Q9H6R0 707 aaKnown RBP14.12□□□□□ -0.15
SKA1-205ENST00000494518 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 VPS13AQ96RL7 3174 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
SKA1-205ENST00000494518 H0Y858 1186 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 DKC1O60832 514 aaKnown RBP eCLIP14.11□□□□□ -0.15
SKA1-205ENST00000494518 CDKL5O76039 1030 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 KLRC2P26717 231 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 HOXA11P31270 313 aaPredicted RBP14.11□□□□□ -0.15
SKA1-205ENST00000494518 RFC5P40937 340 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 NR5A1Q13285 461 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 EPHA7Q15375 998 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 PPP4R3AQ6IN85 833 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 SRGAP1Q7Z6B7 1085 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 ATOH1Q92858 354 aaPredicted RBP14.11□□□□□ -0.15
SKA1-205ENST00000494518 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 APOL6Q9BWW8 343 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 EIF2AQ9BY44 585 aaKnown RBP14.11□□□□□ -0.15
SKA1-205ENST00000494518 FAN1Q9Y2M0 1017 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 HES2Q9Y543 173 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 IRAK3Q9Y616 596 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
SKA1-205ENST00000494518 A0A087WWV3 80 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 F8W810 466 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 NRP1O14786 923 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 ERLIN2O94905 339 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 CTDNEP1O95476 244 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 CNPP09543 421 aaKnown RBP14.1□□□□□ -0.15
SKA1-205ENST00000494518 ITGA4P13612 1032 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 GCFC2P16383 781 aaKnown RBP14.1□□□□□ -0.15
SKA1-205ENST00000494518 OR1G1P47890 313 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 GIT2Q14161 759 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 TAS1R1Q7RTX1 841 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 MRPL10Q7Z7H8 261 aaKnown RBP14.1□□□□□ -0.15
SKA1-205ENST00000494518 FERMT3Q86UX7 667 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 C4orf19Q8IY42 314 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
SKA1-205ENST00000494518 SMG8Q8ND04 991 aaKnown RBP14.1□□□□□ -0.15
SKA1-205ENST00000494518 MTRQ99707 1265 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms