RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 CDHR1Q96JP9 859 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 IWS1Q96ST2 819 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 HSPBP1Q9NZL4 362 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 SNCAIPQ9Y6H5 919 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 ESYT3A0FGR9 886 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 GOLGA6BA6NDN3 693 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 AGPSO00116 658 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 ZNF862O60290 1169 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 PALMO75781 387 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 VGLL4Q14135 290 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 ALKBH5Q6P6C2 394 aaKnown RBP14.94□□□□□ -0.02
VCP-207ENST00000493886 OTUD6AQ7L8S5 288 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 DNAAF5Q86Y56 855 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 XXYLT1Q8NBI6 393 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 ATP6V0A1Q93050 837 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
VCP-207ENST00000493886 NFASCO94856 1347 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 TARSL2A2RTX5 802 aaKnown RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 ZSCAN5CA6NGD5 496 aaPredicted RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 BTNL10A8MVZ5 291 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 F8VZ95 297 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 STAM2O75886 525 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 PSAPP07602 524 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 MCM3P25205 808 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SOX5P35711 763 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SNRPFP62306 86 aaKnown RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 PPARDQ03181 441 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 DRAP1Q14919 205 aaPredicted RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 DLK2Q6UY11 383 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 CEP170P1Q96L14 293 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 MAF1Q9H063 256 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SLC9A2Q9UBY0 812 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 APEX2Q9UBZ4 518 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 TSKSQ9UJT2 592 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 PCDHGC5Q9Y5F6 944 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 WDR90Q96KV7 1748 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 CCDC169A6NNP5 214 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 EVI5O60447 810 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 DKC1O60832 514 aaKnown RBP eCLIP14.93□□□□□ -0.02
VCP-207ENST00000493886 FTCDO95954 541 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 VAMP7P51809 220 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SMTNP53814 917 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 DLG4P78352 724 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SP4Q02446 784 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 CCDC70Q6NSX1 233 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 ZNF572Q7Z3I7 529 aaPredicted RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 NENFQ9UMX5 172 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 DDNO94850 711 aaPredicted RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 STBD1O95210 358 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 NPTX2P47972 431 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.02
VCP-207ENST00000493886 DMP1Q13316 513 aaPredicted RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 TMEM161BQ8NDZ6 487 aa14.93□□□□□ -0.02
VCP-207ENST00000493886 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
VCP-207ENST00000493886 SPATA31C2B4DYI2 1134 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 DDX3XO00571 662 aaKnown RBP eCLIP14.92□□□□□ -0.022e-14■■■□□ 17.9
VCP-207ENST00000493886 TREML2Q5T2D2 321 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 MSL3Q8N5Y2 521 aaKnown RBP14.92□□□□□ -0.02
VCP-207ENST00000493886 ZSWIM2Q8NEG5 633 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 LMO3Q8TAP4 145 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 KIFC3Q9BVG8 833 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 VIPAS39Q9H9C1 493 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 TBX20Q9UMR3 447 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 EXOC7Q9UPT5 735 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 DAAM1Q9Y4D1 1078 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 UTRNP46939 3433 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 GOLGA6CA6NDK9 693 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 MAPK13O15264 365 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 GOLGA6DP0CG33 693 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 ACTR2P61160 394 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 ITIH3Q06033 890 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 CCDC60Q8IWA6 550 aaPredicted RBP14.92□□□□□ -0.02
VCP-207ENST00000493886 CHST13Q8NET6 341 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 KIFAP3Q92845 792 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 GPR88Q9GZN0 384 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 GOLGA6AQ9NYA3 693 aa14.92□□□□□ -0.02
VCP-207ENST00000493886 LCTP09848 1927 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 GRID2IPA4D2P6 1211 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 SORBS3O60504 671 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 IVLP07476 585 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 SOX10P56693 466 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 PPP3CAQ08209 521 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 PHLDB3Q6NSJ2 640 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 ABHD15Q6UXT9 468 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 TSEN2Q8NCE0 465 aaKnown RBP14.91□□□□□ -0.02
VCP-207ENST00000493886 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 HVCN1Q96D96 273 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 GOLPH3Q9H4A6 298 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 KMT5AQ9NQR1 393 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
VCP-207ENST00000493886 SBF1O95248 1867 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms