RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 KRT35Q92764 455 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 TMEM206Q9H813 350 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 LARSQ9P2J5 1176 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 CLRN2A0PK11 232 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 GMNCA6NCL1 334 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 P4HA2O15460 535 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MAPTP10636 758 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 GCLMP48507 274 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MARCKSL1P49006 195 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 FNTAP49354 379 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MAGOHP61326 146 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 GRIPAP1Q4V328 841 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MIER3Q7Z3K6 550 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 FAM160B2Q86V87 743 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 ZSWIM2Q8NEG5 633 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 PLEKHO2Q8TD55 490 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MAGOHBQ96A72 148 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 CYFIP2Q96F07 1278 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 KCNH7Q9NS40 1196 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 PKD2L1Q9P0L9 805 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 CTTNBP2NLQ9P2B4 639 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 PFASO15067 1338 aa17.41■□□□□ 0.38
SEMA4D-220ENST00000492386 MIF4GDA9UHW6 222 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 KIAA0391O15091 583 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 PAEPP09466 180 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 CHRNA5P30532 468 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 PTGIRP43119 386 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 HSD17B4P51659 736 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ALCAMQ13740 583 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ODF2Q5BJF6 829 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 C6orf89Q6UWU4 347 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 RPUSD2Q8IZ73 545 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 VTI1AQ96AJ9 217 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ACCSQ96QU6 501 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 TMOD2Q9NZR1 351 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 COL20A1Q9P218 1284 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ZHX2Q9Y6X8 837 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 FSBPO95073 299 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 DRG2P55039 364 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 EIF3BP55884 814 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 GPC5P78333 572 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 CETN1Q12798 172 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ZNF746Q6NUN9 644 aaPredicted RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 C3orf20Q8ND61 904 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 KAT5Q92993 513 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 TLCD1Q96CP7 247 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 PCDHB18PQ96TA0 734 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 ZSWIM1Q9BR11 485 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 DBR1Q9UK59 544 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 RPTORQ8N122 1335 aa17.4■□□□□ 0.38
SEMA4D-220ENST00000492386 PHF2O75151 1096 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 PLS3P13797 630 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 CHRNB2P17787 502 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 FBXW10Q5XX13 1052 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 PRELID2Q8N945 189 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 XXYLT1Q8NBI6 393 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 C18orf8Q96DM3 657 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 AGBL1Q96MI9 1066 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 NOCTQ9UK39 431 aaKnown RBP17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 FEM1BQ9UK73 627 aa17.39■□□□□ 0.38
SEMA4D-220ENST00000492386 RTN2O75298 545 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 NUDT17P0C025 328 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 RARRES1P49788 294 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 PEX5P50542 639 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 MMS22LQ6ZRQ5 1243 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 UBL4BQ8N7F7 174 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 FLAD1Q8NFF5 587 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 PSMD1Q99460 953 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 GRHL1Q9NZI5 618 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 USP20Q9Y2K6 914 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 SNX24Q9Y343 169 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 CAPN7Q9Y6W3 813 aa17.39■□□□□ 0.37
SEMA4D-220ENST00000492386 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 ZNF536O15090 1300 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 TMEM110-MUSTN1A8MSY1 372 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 MTA2O94776 668 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 SGPL1O95470 568 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 SHBGP04278 402 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 CTNNA2P26232 953 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 IFFO1Q0D2I5 559 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 ICE2Q659A1 982 aa17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 NOP9Q86U38 636 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-220ENST00000492386 CNPY4Q8N129 248 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms