RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 GCOM2Q9BZD3 368 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 SLC2A4RGQ9NR83 387 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 CHST7Q9NS84 486 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 NRBP2Q9NSY0 501 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 AGPAT5Q9NUQ2 364 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 MIOSQ9NXC5 875 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 FBXL21Q9UKT6 434 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 PIN4Q9Y237 131 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 MTF2Q9Y483 593 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 CLUHO75153 1309 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 NID2Q14112 1375 aa9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-208ENST00000484084 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
RTFDC1-208ENST00000484084 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.85
RTFDC1-208ENST00000484084 SOD2P04179 222 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SPATA31D3P0C874 917 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 STARD6P59095 220 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 PUM1Q14671 1186 aaKnown RBP eCLIP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SPECC1Q5M775 1068 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SPATA31D4Q6ZUB0 917 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 DHX32Q7L7V1 743 aaKnown RBP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 ZNF410Q86VK4 478 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 C1orf210Q8IVY1 113 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 REXO1Q8N1G1 1221 aaKnown RBP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 NELL1Q92832 810 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 B3GALT6Q96L58 329 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 TMEM175Q9BSA9 504 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 DDX23Q9BUQ8 820 aaKnown RBP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 HERC2P3Q9BVR0 1158 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 EMILIN2Q9BXX0 1053 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 FOXQ1Q9C009 403 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 GBP3Q9H0R5 595 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 GLT8D2Q9H1C3 349 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SIT1Q9Y3P8 196 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 SAMM50Q9Y512 469 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 DOCK6Q96HP0 2047 aa9.71□□□□□ -0.86
RTFDC1-208ENST00000484084 MYH15Q9Y2K3 1946 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 NOTCH4Q99466 2003 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 KLF18A0A0U1RQI7 1052 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 M0R2N6 131 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 C2CD2LO14523 706 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 TGM5O43548 720 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 CHMP2AO43633 222 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 POMCP01189 267 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 ALDH2P05091 517 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 CPA1P15085 419 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 SFPQP23246 707 aaKnown RBP eCLIP9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 RCAN1P53805 252 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 DSG1Q02413 1049 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 FZD5Q13467 585 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 NPY5RQ15761 445 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 RSPO4Q2I0M5 234 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 CYP26C1Q6V0L0 522 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 RHPN2Q8IUC4 686 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 PJA1Q8NG27 643 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 ETNPPLQ8TBG4 499 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 KCNG4Q8TDN1 519 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 RUBCNQ92622 972 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 FGF14Q92915 247 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 MBOAT7Q96N66 472 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 ARHGEF3Q9NR81 526 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 MRPL17Q9NRX2 175 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 FAN1Q9Y2M0 1017 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 NUMBLQ9Y6R0 609 aa9.7□□□□□ -0.86
RTFDC1-208ENST00000484084 CYP3A7-CYP3A51PA0A087WV96 503 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 GOLGA8AA7E2F4 631 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 GOLGA8BA8MQT2 603 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 EML1O00423 815 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 TDP2O95551 362 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 C1RP00736 705 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 SKIP12755 728 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 CYP3A7P24462 503 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 SFNP31947 248 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 GBP2P32456 591 aaPredicted RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 RAB27AP51159 221 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 USP11P51784 963 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 JAK3P52333 1124 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 GPC5P78333 572 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 CDC42EP1Q00587 391 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 RNASELQ05823 741 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 Q4G0T1 1027 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 XKR3Q5GH77 459 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 LRCH2Q5VUJ6 765 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 PLA2G4FQ68DD2 849 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 PARM1Q6UWI2 310 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 SMG7Q92540 1137 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 PHKBQ93100 1093 aa9.69□□□□□ -0.86
RTFDC1-208ENST00000484084 NXPE3Q969Y0 559 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms