RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 FAM47E-STBD1D6RA91 191 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GOLGA8TH3BQL2 631 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 DDX3XO00571 662 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PJA2O43164 708 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PALMO75781 387 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GOLGA8HP0CJ92 632 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PIM1P11309 404 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 UBL4AP11441 157 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 ENPP1P22413 925 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 HOXC9P31274 260 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 POLGP54098 1239 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 CYB5R4Q7L1T6 521 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 SCFD2Q8WU76 684 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 UBAC1Q9BSL1 405 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 NUP85Q9BW27 656 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PLVAPQ9BX97 442 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 CADM1Q9BY67 442 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 DDX47Q9H0S4 455 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 EBF3Q9H4W6 596 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 BTG4Q9NY30 223 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 KAT6BQ8WYB5 2073 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 C4AP0C0L4 1744 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 C4BP0C0L5 1744 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 SLCO1A2P46721 670 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CSE1LP55060 971 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ARHGEF6Q15052 776 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TNFAIP8L3Q5GJ75 292 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SLC27A3Q5K4L6 730 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 PPP2R2DQ66LE6 453 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ACAD11Q709F0 780 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ANO5Q75V66 913 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 IP6K1Q92551 441 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 STAMQ92783 540 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 VPS50Q96JG6 964 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 AP1M1Q9BXS5 423 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TANGO6Q9C0B7 1094 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 FHDC1Q9C0D6 1143 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 GINM1Q9NU53 330 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 NUMBLQ9Y6R0 609 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SOS2Q07890 1332 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TEX28O15482 410 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SRGNP10124 158 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CREB1P16220 341 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 PTPN4P29074 926 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SLC5A2P31639 672 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 PRKCIP41743 596 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 MAGEA1P43355 309 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 RASSF2P50749 326 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 EHHADHQ08426 723 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 MTFR1Q15390 333 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 MCMDC2Q4G0Z9 681 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 RAVER1Q8IY67 606 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ESX1Q8N693 406 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CKAP2Q8WWK9 683 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CSRNP2Q9H175 543 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CUEDC2Q9H467 287 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 HOXC10Q9NYD6 342 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CHPF2Q9P2E5 772 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 DBR1Q9UK59 544 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 RBMX2Q9Y388 322 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 STK36Q9NRP7 1315 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ECM29Q5VYK3 1845 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TRIM49BA6NDI0 452 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TTC34A8MYJ7 566 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 XPOTO43592 962 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 GH1P01241 217 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TFPTP0C1Z6 253 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 RCVRNP35243 200 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 HOXD13P35453 343 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 CD300CQ08708 224 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ANKDD1AQ495B1 522 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SPDYCQ5MJ68 293 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 SEC14L1Q92503 715 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 LRRC37BQ96QE4 947 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TGS1Q96RS0 853 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 FNBP1Q96RU3 617 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 ARMC7Q9H6L4 198 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 AIPL1Q9NZN9 384 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TTC7AQ9ULT0 858 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 FAF1Q9UNN5 650 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 COQ6Q9Y2Z9 468 aa8.36□□□□□ -1.07
COL4A5-205ENST00000483338 UTP11Q9Y3A2 253 aaKnown RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 HEMK1Q9Y5R4 338 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-205ENST00000483338 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms