RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SYDE2Q5VT97 1194 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 RNF207Q6ZRF8 634 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 Q6ZS52 159 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 PRICKLE2Q7Z3G6 844 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 FAM160B2Q86V87 743 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 STK11IPQ8N1F8 1099 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 LCORLQ8N3X6 602 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 SPEM1Q8N4L4 309 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 DNERQ8NFT8 737 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 STAG1Q8WVM7 1258 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 DNAJB3Q8WWF6 145 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 BAP1Q92560 729 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 ZBTB10Q96DT7 871 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 CASD1Q96PB1 797 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 IER2Q9BTL4 223 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 ANTXR1Q9H6X2 564 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 RBM12Q9NTZ6 932 aaKnown RBP7.63□□□□□ -1.19
CHD6-209ENST00000482596 RNF19AQ9NV58 838 aa7.63□□□□□ -1.19
CHD6-209ENST00000482596 ADAMTS9Q9P2N4 1935 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 NAV3Q8IVL0 2385 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 PCNX1Q96RV3 2341 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 GOLGA4Q13439 2230 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 BCLAF3A2AJT9 711 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 PAPSS2O95340 614 aaPredicted RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 CCDC192P0DO97 292 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 CHRNB1P11230 501 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 BRD2P25440 801 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 RARSP54136 660 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 IRX4P78413 519 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 EXOSC9Q06265 439 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 TMEM62Q0P6H9 643 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 G3BP1Q13283 466 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD6-209ENST00000482596 WDR43Q15061 677 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD6-209ENST00000482596 TAF1BQ53T94 588 aaPredicted RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 KCTD1Q719H9 257 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 PPFIBP1Q86W92 1011 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 TRIM50Q86XT4 487 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 GMCL1P1Q8NEA9 526 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 CHURC1Q8WUH1 139 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 ADAMTS14Q8WXS8 1223 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 ZC3H10Q96K80 434 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 SPATA33Q96N06 139 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 MPHOSPH6Q99547 160 aaKnown RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 PLA2G2FQ9BZM2 168 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 DUSP15Q9H1R2 295 aaPredicted RBP7.62□□□□□ -1.19
CHD6-209ENST00000482596 ADAMTS10Q9H324 1103 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 MRVI1Q9Y6F6 885 aa7.62□□□□□ -1.19
CHD6-209ENST00000482596 ABCA7Q8IZY2 2146 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 FANCIQ9NVI1 1328 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 MTCL1Q9Y4B5 1905 aaKnown RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 IGKV6D-41A0A0C4DH26 115 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 TEX51A0A1B0GUA7 166 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 C9IYK1 514 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 MEFVO15553 781 aaPredicted RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 GGPS1O95749 300 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 CNPP09543 421 aaKnown RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 GNAT1P11488 350 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 RASA1P20936 1047 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 EIF2S3P41091 472 aaKnown RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 SH3BP2P78314 561 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 MRPS6P82932 125 aaKnown RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 PAK2Q13177 524 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 LINC01559Q495D7 138 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 WDR44Q5JSH3 913 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 EHBP1Q8NDI1 1231 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 BCL7CQ8WUZ0 217 aaPredicted RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 UBE2Q2Q8WVN8 375 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
CHD6-209ENST00000482596 MKL1Q969V6 931 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 ADAM2Q99965 735 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 PHF20Q9BVI0 1012 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 VN1R3Q9BXE9 311 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 TELO2Q9Y4R8 837 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 BOD1L1Q8NFC6 3051 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 OTOGQ6ZRI0 2925 aa7.61□□□□□ -1.19
CHD6-209ENST00000482596 PDCD11Q14690 1871 aaKnown RBP7.6□□□□□ -1.19
CHD6-209ENST00000482596 TRABD2BA6NFA1 517 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 ERVH48-1M5A8F1 160 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 KHNYNO15037 678 aaKnown RBP7.6□□□□□ -1.19
CHD6-209ENST00000482596 DCLK1O15075 740 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 SSBP05455 408 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD6-209ENST00000482596 SPATA31D3P0C874 917 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 C6P13671 934 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 CR2P20023 1033 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 MCCP23508 829 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 MAPK8P45983 427 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 NTHL1P78549 312 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 SP2Q02086 613 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 SEMA3BQ13214 749 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 SERINC3Q13530 473 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
CHD6-209ENST00000482596 CELF3Q5SZQ8 465 aaKnown RBP7.6□□□□□ -1.19
CHD6-209ENST00000482596 SPATA31D4Q6ZUB0 917 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 GPR155Q7Z3F1 870 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 KCTD17Q8N5Z5 321 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 PHKBQ93100 1093 aa7.6□□□□□ -1.19
CHD6-209ENST00000482596 CEP95Q96GE4 821 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms