RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 AGXTP21549 392 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 CSF2RBP32927 897 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 RRADP55042 308 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 ANTXR2P58335 489 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 CCT2P78371 535 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 USP10Q14694 798 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 ZNF568Q3ZCX4 644 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 MBNL2Q5VZF2 373 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 KLHDC10Q6PID8 442 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 KCNK18Q7Z418 384 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 LYSMD2Q8IV50 215 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 Q8N1X5 172 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 SLC16A11Q8NCK7 471 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.04□□□□□ -1.6
CBX3-207ENST00000481300 GFM2Q969S9 779 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 AJUBAQ96IF1 538 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 PAWRQ96IZ0 340 aaKnown RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 HAPLN2Q9GZV7 340 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 KATNBL1Q9H079 304 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 PRDM12Q9H4Q4 367 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 ZIM2Q9NZV7 527 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 IP6K2Q9UHH9 426 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
CBX3-207ENST00000481300 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 VWA7Q9Y334 891 aa5.04□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA12O60330 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 ZSCAN20P17040 1043 aaPredicted RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 MGAT5Q09328 741 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 ANO4Q32M45 955 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 ZMAT1Q5H9K5 638 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 GAREM2Q75VX8 874 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 GPR155Q7Z3F1 870 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 RALYLQ86SE5 291 aaKnown RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 RAVER1Q8IY67 606 aaKnown RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 BCL6BQ8N143 479 aaPredicted RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 JADE3Q92613 823 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 FATE1Q969F0 183 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 TEKT5Q96M29 485 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 SLC2A13Q96QE2 648 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 SCAND2PQ9GZW5 306 aaPredicted RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 ZNF277Q9NRM2 450 aaPredicted RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA9Q9Y5G4 932 aaKnown RBP5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA8Q9Y5G5 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA7Q9Y5G6 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA6Q9Y5G7 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA3Q9Y5H0 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 PCDHGA2Q9Y5H1 932 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 SLC4A7Q9Y6M7 1214 aa5.03□□□□□ -1.6
CBX3-207ENST00000481300 SEC24DO94855 1032 aaPredicted RBP5.02□□□□□ -1.61
CBX3-207ENST00000481300 IL33O95760 270 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 FSHBP01225 129 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 C6P13671 934 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 MRE11P49959 708 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 SLC16A1P53985 500 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 NFE2Q16621 373 aaPredicted RBP5.02□□□□□ -1.61
CBX3-207ENST00000481300 TMEM240Q5SV17 173 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 TRIM68Q6AZZ1 485 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 CRIP3Q6Q6R5 217 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 FAM180AQ6UWF9 173 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 FMNL3Q8IVF7 1028 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 SLC41A1Q8IVJ1 513 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 PALM2Q8IXS6 379 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 CPA6Q8N4T0 437 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 PPM1NQ8N819 430 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 Q8TCH9 128 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 TSPEARQ8WU66 669 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 GCDHQ92947 438 aaPredicted RBP5.02□□□□□ -1.61
CBX3-207ENST00000481300 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 UIMC1Q96RL1 719 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 CDH19Q9H159 772 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 DEF6Q9H4E7 631 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 SAP30BPQ9UHR5 308 aaKnown RBP5.02□□□□□ -1.61
CBX3-207ENST00000481300 ANKRD6Q9Y2G4 727 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 PTPN22Q9Y2R2 807 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 GIT1Q9Y2X7 761 aa5.02□□□□□ -1.61
CBX3-207ENST00000481300 A0A0A6YYK5 440 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 MARCH6O60337 910 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ZNF623O75123 536 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 NDUFS2O75306 463 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ABLIM3O94929 683 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 PARNO95453 639 aaKnown RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 ZNF888P0CJ79 500 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 PF4V1P10720 104 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 HNRNPLP14866 589 aaKnown RBP eCLIP5.01□□□□□ -1.61
CBX3-207ENST00000481300 VCAM1P19320 739 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 TACR2P21452 398 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 SELENOPP49908 381 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 MALLQ13021 153 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ADAM15Q13444 863 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ODF1Q14990 250 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ADRM1Q16186 407 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 MUM1L1Q5H9M0 696 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms