RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SAAL1Q96ER3 474 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 FAM49AQ9H0Q0 323 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ADA2Q9NZK5 511 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ROR1Q01973 937 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 UGP2Q16851 508 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CDO1Q16878 200 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 STAMBPL1Q96FJ0 436 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ARAP3Q8WWN8 1544 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 APOA4P06727 396 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 KRT72Q14CN4 511 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 AASDHQ4L235 1098 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 LRRC24Q50LG9 513 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 APOBEC3FQ8IUX4 373 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 EDC3Q96F86 508 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ORAI2Q96SN7 254 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CACNA1CQ13936 2221 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ZMYND10O75800 440 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 HSD17B4P51659 736 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SKOR1P84550 965 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SMYD4Q8IYR2 804 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 KRT35Q92764 455 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 C5orf58C9J3I9 102 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 STAT3P40763 770 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PRAMEP78395 509 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 GTF2H3Q13889 308 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 DCUN1D1Q96GG9 259 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF560Q96MR9 790 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 TARSL2A2RTX5 802 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PALMO75781 387 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ARIH2O95376 493 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 DYRK4Q9NR20 520 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ZHX2Q9Y6X8 837 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CHD4Q14839 1912 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 GPC3P51654 580 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 P3H1Q32P28 736 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 ASAP3Q8TDY4 903 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 TTLL4Q14679 1199 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF568Q3ZCX4 644 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 KCNA1Q09470 495 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 KCNV1Q6PIU1 500 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 TMEM270Q6UE05 265 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 C11orf57Q6ZUT1 292 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.792e-12■■□□□ 14.4
VEGFA-212ENST00000480614 PYGMP11217 842 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 PSMD7P51665 324 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 CDK17Q00537 523 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF555Q8NEP9 628 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 COA7Q96BR5 231 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 HAUS5O94927 633 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 PPP2R2AP63151 447 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 LRRC41Q15345 812 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 CCNYL1Q8N7R7 359 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 EGFL8Q99944 293 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 MRPL4Q9BYD3 311 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 BSDC1Q9NW68 430 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 PRRC2BQ5JSZ5 2229 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 SCP2P22307 547 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 GPS1Q13098 491 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 FAM20AQ96MK3 541 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 TIPINQ9BVW5 301 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 MAP3K20Q9NYL2 800 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 CCDC88CQ9P219 2028 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 ZBTB5O15062 677 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 STXBP2Q15833 593 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 DTX3LQ8TDB6 740 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.11□□□□□ -0.793e-7■■■■■ 41.4
VEGFA-212ENST00000480614 PARD6BQ9BYG5 372 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 KDM1AO60341 852 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 SUPT3HO75486 399 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 MAP4P27816 1152 aaKnown RBP10.11□□□□□ -0.79
VEGFA-212ENST00000480614 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 FAM170AA1A519 330 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 C16orf96A6NNT2 1141 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 DNAJC6O75061 913 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 TEX9Q8N6V9 391 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 TADA1Q96BN2 335 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 NSMCE4AQ9NXX6 385 aa10.11□□□□□ -0.79
VEGFA-212ENST00000480614 AFG1LQ8WV93 481 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 DYDC2Q96IM9 177 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 RUBCNLQ9H714 662 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 NR5A1Q13285 461 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 MTHFD1LQ6UB35 978 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF564Q8TBZ8 553 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CEP152O94986 1710 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 EFNA5P52803 228 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
VEGFA-212ENST00000480614 CYTH2Q99418 400 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms