RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 EMC2Q15006 297 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 OTUD6AQ7L8S5 288 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 ZNF598Q86UK7 904 aaKnown RBP17.58■□□□□ 0.4
GARNL3-215ENST00000478702 ZNF410Q86VK4 478 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 SLC39A11Q8N1S5 342 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 NLRP7Q8WX94 980 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 SNX27Q96L92 541 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 SCLT1Q96NL6 688 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 POMKQ9H5K3 350 aa17.58■□□□□ 0.4
GARNL3-215ENST00000478702 C2orf71A6NGG8 1288 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 C2CD4DB7Z1M9 353 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 H3BQV1 296 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 GAS2O43903 313 aaKnown RBP17.57■□□□□ 0.4
GARNL3-215ENST00000478702 GFRA3O60609 400 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 PPM1AP35813 382 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 MCTP1Q6DN14 999 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 EXOC8Q8IYI6 725 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 C4orf32Q8N8J7 132 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 MRPL43Q8N983 215 aaKnown RBP17.57■□□□□ 0.4
GARNL3-215ENST00000478702 KREMEN2Q8NCW0 462 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 CASP10Q92851 521 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 SMOC2Q9H3U7 446 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 TUFT1Q9NNX1 390 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 SPG21Q9NZD8 308 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 SUCLA2Q9P2R7 463 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-215ENST00000478702 PCDHB6Q9Y5E3 794 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 SPTBN4Q9H254 2564 aa17.57■□□□□ 0.4
GARNL3-215ENST00000478702 H0Y858 1186 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ZBTB39O15060 712 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
GARNL3-215ENST00000478702 BRD1O95696 1058 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 SPATA31C1P0DKV0 1188 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ZSCAN20P17040 1043 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-215ENST00000478702 FGFR4P22455 802 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
GARNL3-215ENST00000478702 KRT17Q04695 432 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ZBTB33Q86T24 672 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ABI1Q8IZP0 508 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 HELQQ8TDG4 1101 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ADAM7Q9H2U9 754 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.56■□□□□ 0.4
GARNL3-215ENST00000478702 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 BMP2KQ9NSY1 1161 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-215ENST00000478702 ANKEF1Q9NU02 776 aa17.56■□□□□ 0.4
GARNL3-215ENST00000478702 A0A087WZ62 844 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 NT5C1B-RDH14C9J2C7 533 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 LAD1O00515 517 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 MED24O75448 989 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 RARRES1P49788 294 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 PTGDRQ13258 359 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 RNF169Q8NCN4 708 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 ERMNQ8TAM6 284 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 FEZF2Q8TBJ5 459 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 ATOH1Q92858 354 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 NLRP4Q96MN2 994 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 MTRQ99707 1265 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 FDXACB1Q9BRP7 624 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 POLR3CQ9BUI4 534 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 GCOM2Q9BZD3 368 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-215ENST00000478702 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 SORCS3Q9UPU3 1222 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 COL4A3BPQ9Y5P4 624 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 FAM186AA6NE01 2351 aa17.55■□□□□ 0.4
GARNL3-215ENST00000478702 PTPRZ1P23471 2315 aaPredicted RBP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 WEE2P0C1S8 567 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 SFPQP23246 707 aaKnown RBP eCLIP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 ITIH3Q06033 890 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 TPRNQ4KMQ1 711 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 KANK3Q6NY19 840 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 TMEM173Q86WV6 379 aaPredicted RBP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 CATSPER3Q86XQ3 398 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 KSR1Q8IVT5 923 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 TMEM105Q8N8V8 129 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 TMEM143Q96AN5 459 aa17.54■□□□□ 0.4
GARNL3-215ENST00000478702 CCDC43Q96MW1 224 aaKnown RBP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 MTCL1Q9Y4B5 1905 aaKnown RBP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 RIF1Q5UIP0 2472 aaKnown RBP17.54■□□□□ 0.4
GARNL3-215ENST00000478702 TDRD15B5MCY1 1934 aaKnown RBP17.53■□□□□ 0.4
GARNL3-215ENST00000478702 DOCK8Q8NF50 2099 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 GALR2O43603 387 aaPredicted RBP17.53■□□□□ 0.4
GARNL3-215ENST00000478702 CSDE1O75534 798 aaKnown RBP17.53■□□□□ 0.4
GARNL3-215ENST00000478702 DGAT1O75907 488 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 EOMESO95936 686 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 XRCC6P12956 609 aaKnown RBP eCLIP17.53■□□□□ 0.4
GARNL3-215ENST00000478702 RPA1P27694 616 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 PRPHP41219 470 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 NUBP1P53384 320 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 BCAR1P56945 870 aa17.53■□□□□ 0.4
GARNL3-215ENST00000478702 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms