RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CPT1CQ8TCG5 803 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 SLC25A43Q8WUT9 341 aaPredicted RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 ZG16BQ96DA0 208 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 CPPED1Q9BRF8 314 aaPredicted RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 OSBPL6Q9BZF3 934 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 TGM5O43548 720 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 CD40P25942 277 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 KPNA1P52294 538 aaPredicted RBP5.88□□□□□ -1.47
UBR3-209ENST00000477461 DSG1Q02413 1049 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 TCEA2Q15560 299 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 MRGPREQ86SM8 312 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 FERMT2Q96AC1 680 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 INTS7Q9NVH2 962 aaKnown RBP5.88□□□□□ -1.47
UBR3-209ENST00000477461 TRPS1Q9UHF7 1281 aa5.88□□□□□ -1.47
UBR3-209ENST00000477461 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
UBR3-209ENST00000477461 NR4A1P22736 598 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 NANOS3P60323 173 aaKnown RBP5.87□□□□□ -1.47
UBR3-209ENST00000477461 ZBTB41Q5SVQ8 909 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 ESPNLQ6ZVH7 1005 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 DNAJC10Q8IXB1 793 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 EFHBQ8N7U6 833 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 GPR150Q8NGU9 434 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 FAM193BQ96PV7 902 aaPredicted RBP5.87□□□□□ -1.47
UBR3-209ENST00000477461 MLST8Q9BVC4 326 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 ANO3Q9BYT9 981 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 FANCLQ9NW38 375 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBR3-209ENST00000477461 USP35Q9P2H5 1018 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 PCDHB6Q9Y5E3 794 aa5.87□□□□□ -1.47
UBR3-209ENST00000477461 PRSS38A1L453 326 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 FOXN1O15353 648 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 LY86O95711 162 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 TGM1P22735 817 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 PTGS2P35354 604 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 SART3Q15020 963 aaKnown RBP5.86□□□□□ -1.47
UBR3-209ENST00000477461 MBNL2Q5VZF2 373 aaKnown RBP5.86□□□□□ -1.47
UBR3-209ENST00000477461 CXorf67Q86X51 503 aaPredicted RBP5.86□□□□□ -1.47
UBR3-209ENST00000477461 XYLT1Q86Y38 959 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 PRRX2Q99811 253 aa5.86□□□□□ -1.47
UBR3-209ENST00000477461 ZNF768Q9H5H4 540 aaKnown RBP5.86□□□□□ -1.47
UBR3-209ENST00000477461 ST20-MTHFSA0A0A6YYL1 179 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 GRXCR1A8MXD5 290 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 SCNN1BP51168 640 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 MGAT5Q09328 741 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 LRRC32Q14392 662 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
UBR3-209ENST00000477461 NOP9Q86U38 636 aaKnown RBP5.85□□□□□ -1.47
UBR3-209ENST00000477461 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 SYNE4Q8N205 404 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 CDYL2Q8N8U2 506 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 FDXACB1Q9BRP7 624 aaPredicted RBP5.85□□□□□ -1.47
UBR3-209ENST00000477461 ORAI3Q9BRQ5 295 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 CPEB1Q9BZB8 566 aaKnown RBP5.85□□□□□ -1.47
UBR3-209ENST00000477461 EIF2B4Q9UI10 523 aaKnown RBP5.85□□□□□ -1.47
UBR3-209ENST00000477461 HDAC5Q9UQL6 1122 aa5.85□□□□□ -1.47
UBR3-209ENST00000477461 TMEM191CA6NGB0 347 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 MTSS1O43312 755 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 CLEC2LP0C7M8 214 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 BMP5P22003 454 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 SEPT7Q16181 437 aaKnown RBP5.84□□□□□ -1.47
UBR3-209ENST00000477461 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 HTR3DQ70Z44 454 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
UBR3-209ENST00000477461 SMC1BQ8NDV3 1235 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 PPP1R14CQ8TAE6 165 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 PROKR1Q8TCW9 393 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 TARS2Q9BW92 718 aaKnown RBP5.84□□□□□ -1.47
UBR3-209ENST00000477461 ENKD1Q9H0I2 346 aa5.84□□□□□ -1.47
UBR3-209ENST00000477461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
UBR3-209ENST00000477461 CCDC88BA6NC98 1476 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 DNAJC6O75061 913 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 PFKMP08237 780 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 POU3F2P20265 443 aaPredicted RBP5.83□□□□□ -1.48
UBR3-209ENST00000477461 XPAP23025 273 aaPredicted RBP5.83□□□□□ -1.48
UBR3-209ENST00000477461 IL2P60568 153 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 DUSP2Q05923 314 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 UNC5BQ8IZJ1 945 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 SYNPOQ8N3V7 929 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 APPBP2Q92624 585 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 NINJ1Q92982 152 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 CRAMP1Q96RY5 1269 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 LSM14BQ9BX40 385 aaKnown RBP5.83□□□□□ -1.48
UBR3-209ENST00000477461 PRDM12Q9H4Q4 367 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 SPON1Q9HCB6 807 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
UBR3-209ENST00000477461 POLR2AP24928 1970 aaKnown RBP5.83□□□□□ -1.48
UBR3-209ENST00000477461 NRP1O14786 923 aa5.82□□□□□ -1.48
UBR3-209ENST00000477461 PPFIA2O75334 1257 aa5.82□□□□□ -1.48
UBR3-209ENST00000477461 RECQL4O94761 1208 aa5.82□□□□□ -1.48
UBR3-209ENST00000477461 ABHD16AO95870 558 aa5.82□□□□□ -1.48
UBR3-209ENST00000477461 GCP02774 474 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms