RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 AKT3Q9Y243 479 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 NOC2LQ9Y3T9 749 aaKnown RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 COL4A3BPQ9Y5P4 624 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CHD8Q9HCK8 2581 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 BRWD1Q9NSI6 2320 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 PLXNA3P51805 1871 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 A0A087WZ62 844 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 FRMD3A2A2Y4 597 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 TMEM221A6NGB7 291 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 TTLL13PA6NNM8 815 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 PROB1E7EW31 1015 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 M0R296 226 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 EDN1P05305 212 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 SSBP05455 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 SLFN14P0C7P3 912 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 SRGAP2CP0DJJ0 459 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 GHRP10912 638 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 DARSP14868 501 aaKnown RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 STAT6P42226 847 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 ZNF131P52739 623 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 CRYBB1P53674 252 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 PTENP60484 403 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 PLEKHG4Q58EX7 1191 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 FAM102BQ5T8I3 360 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 TAS1R3Q7RTX0 852 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 DGLUCYQ7Z3D6 616 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 DEFB128Q7Z7B8 93 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 RTN4RL1Q86UN2 441 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 FAM228AQ86W67 206 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 RHPN2Q8IUC4 686 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 SUGP1Q8IWZ8 645 aaKnown RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 IQUBQ8NA54 791 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 MCPH1Q8NEM0 835 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 DBF4BQ8NFT6 615 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 GDPD5Q8WTR4 605 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 PSPC1Q8WXF1 523 aaKnown RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 LINC01599Q8WXQ3 324 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 EDAQ92838 391 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 PAGE5Q96GU1 130 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 MAP7D2Q96T17 732 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 OSMRQ99650 979 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-204ENST00000474665 KIFC3Q9BVG8 833 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 FGFBP2Q9BYJ0 223 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 CCDC39Q9UFE4 941 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 GINS2Q9Y248 185 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 TRPV2Q9Y5S1 764 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 TECTAO75443 2155 aa7.74□□□□□ -1.17
LIMD1-204ENST00000474665 GAS2O43903 313 aaKnown RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 KLRC4O43908 158 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 MGEA5O60502 916 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 PRPF40AO75400 957 aaKnown RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 NR1I2O75469 434 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 ZNF202O95125 648 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 FGFR4P22455 802 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 TMOD1P28289 359 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CD52P31358 61 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 TXLNAP40222 546 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 SYKP43405 635 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 NPTX2P47972 431 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 VCPP55072 806 aaKnown RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 MBTD1Q05BQ5 628 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 EHHADHQ08426 723 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CUL4BQ13620 913 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 AMHR2Q16671 573 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 HERC4Q5GLZ8 1057 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CDCA2Q69YH5 1023 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CNNM4Q6P4Q7 775 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 KRBA2Q6ZNG9 492 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 TRIM67Q6ZTA4 783 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 SV2BQ7L1I2 683 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 RSPH3Q86UC2 560 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 ADSSL1Q8N142 457 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CRIPAKQ8N1N5 446 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 RNF149Q8NC42 400 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 RASSF8Q8NHQ8 419 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 DDX12PQ92771 950 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 RMDN1Q96DB5 314 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 NLRP4Q96MN2 994 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 JPH2Q9BR39 696 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
LIMD1-204ENST00000474665 TRIM9Q9C026 710 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 CCDC113Q9H0I3 377 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 ERVK-5Q9HDB9 667 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 FAM13BQ9NYF5 915 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 KCND2Q9NZV8 630 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 PADI3Q9ULW8 664 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 USP20Q9Y2K6 914 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 SQORQ9Y6N5 450 aa7.73□□□□□ -1.17
LIMD1-204ENST00000474665 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-204ENST00000474665 ASAP2O43150 1006 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 B4GALT5O43286 388 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 RPLP2P05387 115 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms