RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 HES2Q9Y543 173 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 DNAH14Q0VDD8 3507 aa10.82□□□□□ -0.68
MCF2L-223ENST00000473345 RIF1Q5UIP0 2472 aaKnown RBP10.81□□□□□ -0.68
MCF2L-223ENST00000473345 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 DMXL1Q9Y485 3027 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 DCNP07585 359 aaKnown RBP10.81□□□□□ -0.68
MCF2L-223ENST00000473345 IGFBP6P24592 240 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-223ENST00000473345 KLRC2P26717 231 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 RCAN1P53805 252 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 XKR3Q5GH77 459 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 KIAA0319Q5VV43 1072 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 POTEHQ6S545 545 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 GLB1LQ6UWU2 654 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 CCDC149Q6ZUS6 474 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 MIER3Q7Z3K6 550 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 COLGALT2Q8IYK4 626 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 SLC44A3Q8N4M1 653 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 DCLK2Q8N568 766 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 GSTCDQ8NEC7 633 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 TMEM143Q96AN5 459 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
MCF2L-223ENST00000473345 TEKT3Q9BXF9 490 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 CXCL16Q9H2A7 254 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 VAV3Q9UKW4 847 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 CA14Q9ULX7 337 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 PRG3Q9Y2Y8 225 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-223ENST00000473345 SNX14Q9Y5W7 946 aa10.81□□□□□ -0.68
MCF2L-223ENST00000473345 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CCDC195A0A1B0GUA6 201 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 PAPLNO95428 1278 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CYP3A7P24462 503 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 USP11P51784 963 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 JAK3P52333 1124 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CCT2P78371 535 aaKnown RBP10.8□□□□□ -0.68
MCF2L-223ENST00000473345 DSC1Q08554 894 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 Q4G0T1 1027 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 ZNF410Q86VK4 478 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 GPR152Q8TDT2 470 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 ZFP42Q96MM3 310 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 HERC2P3Q9BVR0 1158 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 GPR62Q9BZJ7 368 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 FOXQ1Q9C009 403 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 TBC1D17Q9HA65 648 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 WDR6Q9NNW5 1121 aaKnown RBP10.8□□□□□ -0.68
MCF2L-223ENST00000473345 XPNPEP1Q9NQW7 623 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 GJB4Q9NTQ9 266 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CLUHO75153 1309 aa10.8□□□□□ -0.68
MCF2L-223ENST00000473345 CACNA1AO00555 2505 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 INPPL1O15357 1258 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 SOD2P04179 222 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 IFNAR1P17181 557 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 SFPQP23246 707 aaKnown RBP eCLIP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 SFNP31947 248 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 AK2P54819 239 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 NTHL1P78549 312 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 FOXK2Q01167 660 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 RNASELQ05823 741 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 TOB2Q14106 344 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 BMP2KLQ5H9B9 411 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 EARS2Q5JPH6 523 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 LILRA6Q6PI73 481 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 C15orf39Q6ZRI6 1047 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 ERMP1Q7Z2K6 904 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 KIAA2013Q8IYS2 634 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 CMASQ8NFW8 434 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 PRPF31Q8WWY3 499 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 GAD1Q99259 594 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 PAAF1Q9BRP4 392 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 RNF26Q9BY78 433 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 DHX33Q9H6R0 707 aaKnown RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 RGL1Q9NZL6 768 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 EPS15L1Q9UBC2 864 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 FBXL21Q9UKT6 434 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 MTF2Q9Y483 593 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-223ENST00000473345 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
MCF2L-223ENST00000473345 DOCK8Q8NF50 2099 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 SHISA7A6NL88 538 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 ANHXE9PGG2 379 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 ADAM12O43184 909 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 SRGAP2CP0DJJ0 459 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
MCF2L-223ENST00000473345 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 GNA11P29992 359 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 GBP2P32456 591 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-223ENST00000473345 MLH1P40692 756 aa10.78□□□□□ -0.68
MCF2L-223ENST00000473345 SCNN1GP51170 649 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms