RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L15C9J2P7 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L13C9JLJ4 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L11C9JVI0 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L18D6R9N7 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L22D6RA61 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L17D6RBQ6 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L19D6RCP7 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CSE1LP55060 971 aaKnown RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 USP17L6PQ6QN14 398 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KRT14P02533 472 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NRG3P56975 720 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GJC2Q5T442 439 aaPredicted RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CNOT8Q9UFF9 292 aaKnown RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TRIM32Q13049 653 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SYTL3Q4VX76 610 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NFU1Q9UMS0 254 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 A8MXQ7 604 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TBL3Q12788 808 aaKnown RBP14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TWF1Q12792 350 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GRAMD4Q6IC98 578 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MID2Q9UJV3 735 aa14.04□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TLR2O60603 784 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PPP2R3CQ969Q6 453 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ANGPTL2Q9UKU9 493 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PNMA8BQ9ULN7 279 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GPS1Q13098 491 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 FAM102AQ5T9C2 384 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SYT2Q8N9I0 419 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PUS7LQ9H0K6 701 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 AURKCQ9UQB9 309 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PCP11498 1178 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ABCD1P33897 745 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TRPC1P48995 793 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ADAM33Q9BZ11 813 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 FHDC1Q9C0D6 1143 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MAP3K20Q9NYL2 800 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KIAA0232Q92628 1395 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 RWDD2BP57060 319 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 HDDC2Q7Z4H3 204 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ZNF302Q9NR11 478 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GABBR1Q9UBS5 961 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 DIDO1Q9BTC0 2240 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KRT37O76014 449 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CRKP46108 304 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SLC16A1P53985 500 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SH3BGRP55822 239 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 LRRC8EQ6NSJ5 796 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 FAM160B2Q86V87 743 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ATP11CQ8NB49 1132 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CUEDC2Q9H467 287 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ASNSD1Q9NWL6 643 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SNUPNO95149 360 aaKnown RBP14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PCSK7Q16549 785 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NT5DC4Q86YG4 428 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 POLE3Q9NRF9 147 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 POTEMA6NI47 508 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CYBBP04839 570 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ATP6V1C1P21283 382 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 EPHB4P54760 987 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ZNF445P59923 1031 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 NNTQ13423 1086 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MDH1BQ5I0G3 518 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 DEPDC1Q5TB30 811 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 IRAK1BP1Q5VVH5 260 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 AP1ARQ63HQ0 302 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 EPM2AIP1Q7L775 607 aaPredicted RBP14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MB21D1Q8N884 522 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 SNAP23O00161 211 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms