RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 MAN1C1Q9NR34 630 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 AGPAT5Q9NUQ2 364 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 FAM105AQ9NUU6 356 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 DKK4Q9UBT3 224 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 CACNA1AO00555 2505 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 KRBA1A5PL33 1030 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 BACH1O14867 736 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TBX3O15119 743 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 XRCC6P12956 609 aaKnown RBP eCLIP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 PFKLP17858 780 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MCM5P33992 734 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 CLK2P49760 499 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 DAB2IPQ5VWQ8 1189 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 KCTD17Q8N5Z5 321 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 SEC62Q99442 399 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 NRDE2Q9H7Z3 1164 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 C6orf50Q9HD87 102 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 SCUBE2Q9NQ36 999 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TBC1D13Q9NVG8 400 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 EVLQ9UI08 416 aaPredicted RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MYH9P35579 1960 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 GREB1Q4ZG55 1949 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 B4E1Z4 1266 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 H7C4K7 107 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 PER2O15055 1255 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MGEA5O60502 916 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MAFO75444 373 aaPredicted RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 PDGFBP01127 241 aaPredicted RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 GOLGA8HP0CJ92 632 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 GCFC2P16383 781 aaKnown RBP6.41□□□□□ -1.38
CXXC4-202ENST00000466963 MUTP22033 750 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TGM1P22735 817 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 RAB33AQ14088 237 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 FBXO43Q4G163 708 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 FAM102BQ5T8I3 360 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 CACNA2D4Q7Z3S7 1137 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 TSHZ2Q9NRE2 1034 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 ASB3Q9Y575 518 aa6.41□□□□□ -1.38
CXXC4-202ENST00000466963 WDR81Q562E7 1941 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 A0A0D9SFI3 127 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 CCDC69A6NI79 296 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 HOXA13P31271 388 aaPredicted RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 KRT32Q14532 448 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 LLGL2Q6P1M3 1020 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 OTUD6AQ7L8S5 288 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 HAUS6Q7Z4H7 955 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 RALGPS2Q86X27 583 aaPredicted RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 MAML2Q8IZL2 1156 aaPredicted RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 DDX27Q96GQ7 796 aaKnown RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 ANO3Q9BYT9 981 aa6.4□□□□□ -1.38
CXXC4-202ENST00000466963 SH2B1Q9NRF2 756 aaPredicted RBP6.4□□□□□ -1.38
CXXC4-202ENST00000466963 COL4A2P08572 1712 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 CYP3A7-CYP3A51PA0A087WV96 503 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 CCDC195A0A1B0GUA6 201 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 STK25O00506 426 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 CEACAM1P13688 526 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 PTGS1P23219 599 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 CYP3A7P24462 503 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 SMARCB1Q12824 385 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 PTGDRQ13258 359 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 RNF20Q5VTR2 975 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 NOTUMQ6P988 496 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 SMC5Q8IY18 1101 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 ELMOD1Q8N336 334 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF707Q96C28 371 aaPredicted RBP6.4□□□□□ -1.39
CXXC4-202ENST00000466963 VAT1LQ9HCJ6 419 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 BRWD1Q9NSI6 2320 aa6.4□□□□□ -1.39
CXXC4-202ENST00000466963 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 TM4SF5O14894 197 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CNPP09543 421 aaKnown RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 EPCAMP16422 314 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 DDX6P26196 483 aaKnown RBP eCLIP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ABCD1P33897 745 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CXCL12P48061 93 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CSTF1Q05048 431 aaKnown RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 FAM187BQ17R55 369 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 Q4G0T1 1027 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 PPM1LQ5SGD2 360 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 EFCAB12Q6NXP0 572 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 TMTC3Q6ZXV5 915 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 PLA2G4DQ86XP0 818 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 C12orf50Q8NA57 414 aaPredicted RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CHMP4CQ96CF2 233 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CEP295NLQ96MC4 621 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 LSM14BQ9BX40 385 aaKnown RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 TEKT3Q9BXF9 490 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 KIF9Q9HAQ2 790 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 BARHL2Q9NY43 387 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 AKT3Q9Y243 479 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 EIF5BO60841 1220 aaKnown RBP6.39□□□□□ -1.39
CXXC4-202ENST00000466963 CDK4P11802 303 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 ITGA4P13612 1032 aa6.39□□□□□ -1.39
CXXC4-202ENST00000466963 EPHA5P54756 1037 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms