RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 HFE2Q6ZVN8 426 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 MTRQ99707 1265 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 HSD17B14Q9BPX1 270 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 PCDHB2Q9Y5E7 798 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
SOX2-OT-203ENST00000466034 DTNBO60941 627 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CXCL14O95715 111 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 SRGAP2CP0DJJ0 459 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CTSAP10619 480 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 AXLP30530 894 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 ZXDAP98168 799 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 ITIH3Q06033 890 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 MXD4Q14582 209 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CALCRLQ16602 461 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 VPS52Q8N1B4 723 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 RPGRIP1Q96KN7 1286 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 TMEM175Q9BSA9 504 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 ANKEF1Q9NU02 776 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
SOX2-OT-203ENST00000466034 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 ZBTB39O15060 712 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 INPPL1O15357 1258 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 DGAT1O75907 488 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 SLC11A1P49279 550 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 PTENP60484 403 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 BCL7CQ8WUZ0 217 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 NECTIN4Q96NY8 510 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 DZANK1Q9NVP4 752 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
SOX2-OT-203ENST00000466034 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 TMEM221A6NGB7 291 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 M0R296 226 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 B4GALT3O60512 393 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 NEMFO60524 1076 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 JAK2O60674 1132 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 NEK4P51957 841 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 TFDP1Q14186 410 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
SOX2-OT-203ENST00000466034 WDFY4Q6ZS81 3184 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 WNT7AO00755 349 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 TSPAN1O60635 241 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 DDHD2O94830 711 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 ERLIN2O94905 339 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 ARL2P36404 184 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 MTHFRP42898 656 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 RARRES1P49788 294 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 SIGLEC14Q08ET2 396 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 TRIM29Q14134 588 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 AMHR2Q16671 573 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 PTPN21Q16825 1174 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 SMG8Q8ND04 991 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 ZDBF2Q9HCK1 2354 aa13.87□□□□□ -0.19
SOX2-OT-203ENST00000466034 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
SOX2-OT-203ENST00000466034 LILRB3O75022 631 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms