RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 TRIM51Q9BSJ1 452 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 DCLRE1BQ9H816 532 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 PITPNM2Q9BZ72 1349 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 SETSIPP0DME0 302 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 CHRNA3P32297 505 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 PSMC4P43686 418 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 PLTPP55058 493 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 MAPK7Q13164 816 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 OR52E8Q6IFG1 317 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 JAMLQ86YT9 394 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 ZC3H3Q8IXZ2 948 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 HPS3Q969F9 1004 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 FAM136AQ96C01 138 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 IFT43Q96FT9 208 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 DMAP1Q9NPF5 467 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 BLOC1S4Q9NUP1 217 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 STOML1Q9UBI4 398 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 NKX1-2Q9UD57 310 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 LRCH1Q9Y2L9 728 aa12.4□□□□□ -0.42
TNRC6A-205ENST00000464539 TRAFD1O14545 582 aaPredicted RBP12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 ECE2O60344 883 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 GGPS1O95749 300 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 IMPDH2P12268 514 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 SKIP12755 728 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 MTFR1Q15390 333 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 UTP4Q969X6 686 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 NUDCD1Q96RS6 583 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 SEMA4AQ9H3S1 761 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 BARHL2Q9NY43 387 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 PDP2Q9P2J9 529 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 PCYOX1Q9UHG3 505 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 USP20Q9Y2K6 914 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
TNRC6A-205ENST00000464539 RGL2O15211 777 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 DDX3YO15523 660 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 YARSP54577 528 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ARID5AQ03989 594 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 GRB10Q13322 594 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ARHGEF18Q6ZSZ5 1173 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 INTS8Q75QN2 995 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 LARGE2Q8N3Y3 721 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ATL2Q8NHH9 583 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 CDK5RAP3Q96JB5 506 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 FGD4Q96M96 766 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 VCX3BQ9H321 246 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 VCX3AQ9NNX9 186 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 SAGE1Q9NXZ1 904 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 GRHL1Q9NZI5 618 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 COL4A5P29400 1685 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 MAGEA13PA6NCF6 341 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 MAPK13O15264 365 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 PHF2O75151 1096 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 COQ9O75208 318 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 TCEA3O75764 348 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 DCTN3O75935 186 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 VHLP40337 213 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 TECP42680 631 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 PTGIRP43119 386 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 OCRLQ01968 901 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 PPP1R21Q6ZMI0 780 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RAD54LQ92698 747 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RPS6KC1Q96S38 1066 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 TIPINQ9BVW5 301 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 LARSQ9P2J5 1176 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 SNX24Q9Y343 169 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms