RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SPDYE3A6NKU9 549 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 M0R2N6 131 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 B4GALT3O60512 393 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 SRFP11831 508 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 ALDH7A1P49419 539 aaKnown RBP12.52□□□□□ -0.41
SSR3-202ENST00000463503 ATXN1P54253 815 aaKnown RBP12.52□□□□□ -0.41
SSR3-202ENST00000463503 GIT2Q14161 759 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 ST3GAL2Q16842 350 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.41
SSR3-202ENST00000463503 IGSF21Q96ID5 467 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
SSR3-202ENST00000463503 ADAMTS10Q9H324 1103 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 ARID2Q68CP9 1835 aa12.52□□□□□ -0.41
SSR3-202ENST00000463503 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 ZC3H11AO75152 810 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSR3-202ENST00000463503 FOSP01100 380 aaPredicted RBP12.51□□□□□ -0.41
SSR3-202ENST00000463503 HSP90AA1P07900 732 aaKnown RBP12.51□□□□□ -0.41
SSR3-202ENST00000463503 CLCN3P51790 818 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 ADCY7P51828 1080 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 AP3B2Q13367 1082 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 TRIM29Q14134 588 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 ZNF484Q5JVG2 852 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 RNF169Q8NCN4 708 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
SSR3-202ENST00000463503 STK25O00506 426 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 LILRB3O75022 631 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 LRRN2O75325 713 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 DDIT3P35638 169 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 NLRP11P59045 1033 aaKnown RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 NLRP5P59047 1200 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 CEP55Q53EZ4 464 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 BLIDQ8IZY5 108 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 SLC44A3Q8N4M1 653 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 MYADMQ96S97 322 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 FOXQ1Q9C009 403 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 ZNF302Q9NR11 478 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 SIT1Q9Y3P8 196 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 CLUHO75153 1309 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 PDCD11Q14690 1871 aaKnown RBP12.5□□□□□ -0.41
SSR3-202ENST00000463503 GREB1Q4ZG55 1949 aa12.5□□□□□ -0.41
SSR3-202ENST00000463503 FASNP49327 2511 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 MEIS1O00470 390 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 BACH1O14867 736 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 PAPLNO95428 1278 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 GALTP07902 379 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 ADRB1P08588 477 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 CNPP09543 421 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 ZSCAN20P17040 1043 aaPredicted RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 SYT1P21579 422 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 TGM1P22735 817 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 EIF4BP23588 611 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.412e-11■■□□□ 12.7
SSR3-202ENST00000463503 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 FAM160B1Q5W0V3 765 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 PDXDC2PQ6P474 469 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 METTL13Q8N6R0 699 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 IPO9Q96P70 1041 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 KLHL5Q96PQ7 755 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 WDR6Q9NNW5 1121 aaKnown RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 TBC1D13Q9NVG8 400 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
SSR3-202ENST00000463503 VWA8A3KMH1 1905 aa12.49□□□□□ -0.41
SSR3-202ENST00000463503 SPTLC1O15269 473 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
SSR3-202ENST00000463503 FGFR4P22455 802 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 RFX1P22670 979 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 KRT2P35908 639 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 SLC11A1P49279 550 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 GPC3P51654 580 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 HTR4Q13639 388 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 SAFBQ15424 915 aaKnown RBP eCLIP12.48□□□□□ -0.41
SSR3-202ENST00000463503 ZNF528Q3MIS6 628 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
SSR3-202ENST00000463503 KIAA0319Q5VV43 1072 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
SSR3-202ENST00000463503 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms