RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ADPGKQ9BRR6 497 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 KIFC3Q9BVG8 833 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 TRIM6Q9C030 488 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-204ENST00000463487 FZD8Q9H461 694 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 ELAC1Q9H777 363 aaKnown RBP21.8■■□□□ 1.08
COL9A3-204ENST00000463487 ARHGAP28Q9P2N2 729 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 INSL6Q9Y581 213 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 CNTNAP2Q9UHC6 1331 aa21.8■■□□□ 1.08
COL9A3-204ENST00000463487 A0A0U1RQF3 1178 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 C9IYK1 514 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 K7ENM7 598 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 ACKR2O00590 384 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 N4BP3O15049 544 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 HOXA2O43364 376 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 IBSPP21815 317 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-204ENST00000463487 KANK3Q6NY19 840 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 RTN4RL1Q86UN2 441 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-204ENST00000463487 TMEM87AQ8NBN3 555 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 CNNM3Q8NE01 707 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 TRIM9Q9C026 710 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 CCDC113Q9H0I3 377 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 TMEM161AQ9NX61 479 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 SERTAD1Q9UHV2 236 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 ADGRA3Q8IWK6 1321 aa21.79■■□□□ 1.08
COL9A3-204ENST00000463487 EOMESO95936 686 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 MAPTP10636 758 aaKnown RBP21.78■■□□□ 1.08
COL9A3-204ENST00000463487 NCKAP1LP55160 1127 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 ASIC1P78348 528 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 FAM109BQ6ICB4 259 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-204ENST00000463487 FAM117BQ6P1L5 589 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 CNNM4Q6P4Q7 775 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 STXBP4Q6ZWJ1 553 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 HAUS6Q7Z4H7 955 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 RSPH1Q8WYR4 309 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 DNAJC19Q96DA6 116 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 PGBD4Q96DM1 585 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 C7orf25Q9BPX7 421 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 MRPL4Q9BYD3 311 aaKnown RBP21.78■■□□□ 1.08
COL9A3-204ENST00000463487 PANK4Q9NVE7 773 aa21.78■■□□□ 1.08
COL9A3-204ENST00000463487 TTC3P53804 2025 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 GRXCR1A8MXD5 290 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ACTN4O43707 911 aaKnown RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ZNF202O95125 648 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ARF4P18085 180 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 DNAJB2P25686 324 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 HOXA11P31270 313 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 AFMP43652 599 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 FAM160A1Q05DH4 1040 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ALCAMQ13740 583 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 AMHR2Q16671 573 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 HERC4Q5GLZ8 1057 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 SLC27A1Q6PCB7 646 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ECHDC2Q86YB7 292 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 ABI1Q8IZP0 508 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 TMEM161BQ8NDZ6 487 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 STAMQ92783 540 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 PBX4Q9BYU1 374 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 MRPL44Q9H9J2 332 aaKnown RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 FAM105AQ9NUU6 356 aa21.77■■□□□ 1.08
COL9A3-204ENST00000463487 HOOK1Q9UJC3 728 aaKnown RBP21.77■■□□□ 1.08
COL9A3-204ENST00000463487 TMEM265A0A087WTH1 108 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 A0A1B0GUA9 196 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 B4GALT5O43286 388 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 RANBP2P49792 3224 aaKnown RBP21.76■■□□□ 1.07
COL9A3-204ENST00000463487 RABGGTBP53611 331 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 FAM189BP81408 668 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 LONRF3Q496Y0 759 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 GPR153Q6NV75 609 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 SFR1Q86XK3 245 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 RNF169Q8NCN4 708 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 KCNN1Q92952 543 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 CCDC47Q96A33 483 aaKnown RBP21.76■■□□□ 1.07
COL9A3-204ENST00000463487 TIFAQ96CG3 184 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 BICD1Q96G01 975 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 CPB2Q96IY4 423 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 GOLPH3LQ9H4A5 285 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 OLFML3Q9NRN5 406 aa21.76■■□□□ 1.07
COL9A3-204ENST00000463487 FRMD3A2A2Y4 597 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 GOLGA6L22H0YM25 854 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 UBE2HP62256 183 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 HTRA4P83105 476 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-204ENST00000463487 DCAF4L1Q3SXM0 396 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 ATF7IP2Q5U623 682 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 KRBA2Q6ZNG9 492 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 CLEC17AQ6ZS10 378 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 TMCO2Q7Z6W1 182 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-204ENST00000463487 HVCN1Q96D96 273 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 PAGE5Q96GU1 130 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 ST6GALNAC4Q9H4F1 302 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 UBN1Q9NPG3 1134 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 PCDHB2Q9Y5E7 798 aa21.75■■□□□ 1.07
COL9A3-204ENST00000463487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-204ENST00000463487 PVALEFA0A1B0GWK0 134 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 ZNF623O75123 536 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 DGKIO75912 1065 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 UNC13DQ70J99 1090 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 EXOC7Q9UPT5 735 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 PCDHB13Q9Y5F0 798 aa21.74■■□□□ 1.07
COL9A3-204ENST00000463487 PTPRSQ13332 1948 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms