RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ERLIN2O94905 339 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 SLC11A1P49279 550 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 MBTD1Q05BQ5 628 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 RABEP1Q15276 862 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
NUP50-213ENST00000461437 AMHR2Q16671 573 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 GLB1LQ6UWU2 654 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 FAM122AQ96E09 287 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
NUP50-213ENST00000461437 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
NUP50-213ENST00000461437 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
NUP50-213ENST00000461437 MYH11P35749 1972 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 ASAP2O43150 1006 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 ZNF623O75123 536 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 POMCP01189 267 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 PPM1AP35813 382 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 RAB27AP51159 221 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 KRT17Q04695 432 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
NUP50-213ENST00000461437 SMRP1Q8NCR6 262 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 FEZF2Q8TBJ5 459 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 BSNDQ8WZ55 320 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 RSAD1Q9HA92 442 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
NUP50-213ENST00000461437 IPPQ9Y573 584 aa17.23■□□□□ 0.35
NUP50-213ENST00000461437 PLXNA3P51805 1871 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 LRRIQ4A6NIV6 560 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 GALTP07902 379 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 SKIP12755 728 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 ARF4P18085 180 aaPredicted RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 ALDH7A1P49419 539 aaKnown RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 TFDP1Q14186 410 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 MXD4Q14582 209 aaPredicted RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 ADHFE1Q8IWW8 467 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 PGBD4Q96DM1 585 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 LRFN3Q9BTN0 628 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 MIOSQ9NXC5 875 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
NUP50-213ENST00000461437 FAM50BQ9Y247 325 aa17.22■□□□□ 0.35
NUP50-213ENST00000461437 C2orf71A6NGG8 1288 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 PI4K2BG5E9Z4 385 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 NPTXRO95502 500 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 EYA4O95677 639 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 SSBP05455 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUP50-213ENST00000461437 ITGA4P13612 1032 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 LIG1P18858 919 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.35
NUP50-213ENST00000461437 MLH1P40692 756 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 COASYQ13057 564 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 PTGDRQ13258 359 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 IL17AQ16552 155 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 MCTP1Q6DN14 999 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 PADI6Q6TGC4 694 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 IGSF21Q96ID5 467 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 ZFP42Q96MM3 310 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 GAD1Q99259 594 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
NUP50-213ENST00000461437 ZBP1Q9H171 429 aa17.21■□□□□ 0.35
NUP50-213ENST00000461437 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 F8W810 466 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 ST18O60284 1047 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 CXCL14O95715 111 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 EDN1P05305 212 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 SP100P23497 879 aaPredicted RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 AKAP5P24588 427 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 U2AF2P26368 475 aaKnown RBP eCLIP17.2■□□□□ 0.34
NUP50-213ENST00000461437 RPA1P27694 616 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 GJB2P29033 226 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 CDC25AP30304 524 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 KCNC3Q14003 757 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 SMC1AQ14683 1233 aaKnown RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 NOTUMQ6P988 496 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 SYCE2Q6PIF2 218 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 NGRNQ9NPE2 291 aaKnown RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 KLK14Q9P0G3 267 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 CACNG4Q9UBN1 327 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms