RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 IL18BPO95998 194 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 ATF2P15336 505 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FBLN1P23142 703 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 GLDCP23378 1020 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 THBS2P35442 1172 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 MCAMP43121 646 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 NEK3P51956 506 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 PER3P56645 1201 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FOXO4P98177 505 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 ADAM9Q13443 819 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 SMAD4Q13485 552 aaKnown RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 GJC2Q5T442 439 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 THEMIS2Q5TEJ8 643 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 B3GNT9Q6UX72 402 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 TTLL10Q6ZVT0 673 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 SRGAP1Q7Z6B7 1085 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 FAM129CQ86XR2 697 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 RHOT1Q8IXI2 618 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 SAMD3Q8N6K7 520 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 KYQ8NBH2 561 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 PPP1R35Q8TAP8 253 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 RIN2Q8WYP3 895 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 DPF2Q92785 391 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 WDR92Q96MX6 357 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 UIMC1Q96RL1 719 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 UHRF1Q96T88 793 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 C11orf84Q9BUA3 381 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 ZNF700Q9H0M5 742 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 KCND1Q9NSA2 647 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 RBM12Q9NTZ6 932 aaKnown RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.99□□□□□ -1.77
VCL-203ENST00000461383 Q9UFV3 132 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 MBD1Q9UIS9 605 aaPredicted RBP3.99□□□□□ -1.77
VCL-203ENST00000461383 CDC42EP3Q9UKI2 254 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 LIMCH1Q9UPQ0 1083 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 PCDHA5Q9Y5H7 936 aa3.99□□□□□ -1.77
VCL-203ENST00000461383 IRS2Q9Y4H2 1338 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 H3BML4 177 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 APAF1O14727 1248 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 TPP1O14773 563 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 N4BP3O15049 544 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 PHF2O75151 1096 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 MAFO75444 373 aaPredicted RBP3.98□□□□□ -1.77
VCL-203ENST00000461383 FTLP02792 175 aaPredicted RBP3.98□□□□□ -1.77
VCL-203ENST00000461383 CHGBP05060 677 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 ZSCAN22P10073 491 aaPredicted RBP3.98□□□□□ -1.77
VCL-203ENST00000461383 PHKG2P15735 406 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 ADSLP30566 484 aaPredicted RBP3.98□□□□□ -1.77
VCL-203ENST00000461383 LIMS1P48059 325 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 MEOX1P50221 254 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 FXR1P51114 621 aaKnown RBP eCLIP3.98□□□□□ -1.77
VCL-203ENST00000461383 STAT5BP51692 787 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 KCNQ1P51787 676 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 EPHB3P54753 998 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 IL10RAQ13651 578 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 KIAA0753Q2KHM9 967 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 C3orf36Q3SXR2 165 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 DAAM2Q86T65 1068 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 CERS3Q8IU89 383 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 DRC7Q8IY82 874 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 RTKN2Q8IZC4 609 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 GPR156Q8NFN8 814 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 FBXO41Q8TF61 875 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 KAT5Q92993 513 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 RGMAQ96B86 450 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 SGPP1Q9BX95 441 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 MCOLN1Q9GZU1 580 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 L2HGDHQ9H9P8 463 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 CHST12Q9NRB3 414 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 FAM184BQ9ULE4 1060 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 PCDHA13Q9Y5I0 950 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 CFAP20Q9Y6A4 193 aaKnown RBP3.98□□□□□ -1.77
VCL-203ENST00000461383 PMF1-BGLAPU3KQ54 211 aa3.98□□□□□ -1.77
VCL-203ENST00000461383 RPTORQ8N122 1335 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 MYOCOSA0A1B0GUC4 107 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 ANO9A1A5B4 782 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 PMM2O15305 246 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 B3GALT2O43825 422 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 SEMA7AO75326 666 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 EIF3JO75822 258 aaKnown RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 SEC24DO94855 1032 aaPredicted RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 UBXN7O94888 489 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 ENDOD1O94919 500 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 ZBED1O96006 694 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 LDHAP00338 332 aaKnown RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 HMGCRP04035 888 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 RHCEP18577 417 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 HTR1BP28222 390 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 ECHS1P30084 290 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 IL12RB1P42701 662 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 CACNB3P54284 484 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 SESN2P58004 480 aaPredicted RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 ANTXR2P58335 489 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 FAM193AP78312 1265 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 MEF2AQ02078 507 aaPredicted RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 RHDQ02161 417 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 CD69Q07108 199 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms