RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 POLR2MP0CAP2 368 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 SYN1P17600 705 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 RCAN1P53805 252 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 RPS26P62854 115 aaKnown RBP7.94□□□□□ -1.14
NUP50-212ENST00000461194 FANCCQ00597 558 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 STXBP2Q15833 593 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 TRIM60Q495X7 471 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 TMEM63BQ5T3F8 832 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 ARHGEF16Q5VV41 709 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 BLOC1S2Q6QNY1 142 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 SMG8Q8ND04 991 aaKnown RBP7.94□□□□□ -1.14
NUP50-212ENST00000461194 PHC3Q8NDX5 983 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 GPBAR1Q8TDU6 330 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 PIBF1Q8WXW3 757 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 GLT1D1Q96MS3 346 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 TMEM74Q96NL1 305 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
NUP50-212ENST00000461194 GDF15Q99988 308 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 PDCD2LQ9BRP1 358 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 RSRP1Q9BUV0 290 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 CEP41Q9BYV8 373 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 STARD7Q9NQZ5 370 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 PXMP2Q9NR77 195 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 KBTBD4Q9NVX7 518 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 RBM28Q9NW13 759 aaKnown RBP7.94□□□□□ -1.14
NUP50-212ENST00000461194 SEC63Q9UGP8 760 aaKnown RBP7.94□□□□□ -1.14
NUP50-212ENST00000461194 ATP11BQ9Y2G3 1177 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 SMCHD1A6NHR9 2005 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 ELP1O95163 1332 aa7.94□□□□□ -1.14
NUP50-212ENST00000461194 KLF18A0A0U1RQI7 1052 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 ZEB2O60315 1214 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 EIF3JO75822 258 aaKnown RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 CABYRO75952 493 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 CPA1P15085 419 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 TFE3P19532 575 aaPredicted RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 PTGS1P23219 599 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 RPS6KB1P23443 525 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 HOXA13P31271 388 aaPredicted RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 BMP8BP34820 402 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 BEX3Q00994 111 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 PTPN11Q06124 597 aaPredicted RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 PWP1Q13610 501 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 TTLL4Q14679 1199 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 PPP2R5BQ15173 497 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 FSCN1Q16658 493 aaKnown RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 HABP4Q5JVS0 413 aaKnown RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 ANKRD34AQ69YU3 496 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 CCDC62Q6P9F0 684 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 Q6ZUG5 572 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 ERMP1Q7Z2K6 904 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 ANKRD33Q7Z3H0 272 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 VSIG10LQ86VR7 867 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 MEGF10Q96KG7 1140 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 TOX2Q96NM4 488 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 AGXT2Q9BYV1 514 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
NUP50-212ENST00000461194 KRT82Q9NSB4 513 aa7.93□□□□□ -1.14
NUP50-212ENST00000461194 FRMPD3Q5JV73 1810 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 A0A0U1RQG5 324 aaPredicted RBP7.92□□□□□ -1.14
NUP50-212ENST00000461194 CCDC196A0A1B0GTZ2 297 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 A0A1W2PPC1 479 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 GOLGA8AA7E2F4 631 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 GOLGA8BA8MQT2 603 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 ARVCFO00192 962 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 MEIS2O14770 477 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 ARIH2O95376 493 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 TXNP10599 105 aaKnown RBP7.92□□□□□ -1.14
NUP50-212ENST00000461194 CASTP20810 708 aaKnown RBP7.92□□□□□ -1.14
NUP50-212ENST00000461194 MAGEA10P43363 369 aaPredicted RBP7.92□□□□□ -1.14
NUP50-212ENST00000461194 CPT1AP50416 773 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 CDK7P50613 346 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 EVCP57679 992 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 TLE2Q04725 743 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 SOX4Q06945 474 aaPredicted RBP7.92□□□□□ -1.14
NUP50-212ENST00000461194 SEPT6Q14141 434 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 PGM5Q15124 567 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 CXCL17Q6UXB2 119 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 SEPT14Q6ZU15 432 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 RUFY3Q7L099 469 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 OR6J1Q8NGC5 347 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 BRF1Q92994 677 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 CUL5Q93034 780 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 TM6SF1Q9BZW5 370 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 SUGCTQ9HAC7 445 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 PRKAG2Q9UGJ0 569 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 PCDHA4Q9UN74 947 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 FRMPD4Q14CM0 1322 aa7.92□□□□□ -1.14
NUP50-212ENST00000461194 hCG_1642624A0A1W2PR95 340 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 PQBP1O60828 265 aaKnown RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 EIF5BO60841 1220 aaKnown RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 PF4P02776 101 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 CLTBP09497 229 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 MYCLP12524 364 aaPredicted RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 CCND2P30279 289 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 METAP2P50579 478 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP50-212ENST00000461194 FAM160A1Q05DH4 1040 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms