RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	TICAM2	Q86XR7	235 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	JAML	Q86YT9	394 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	SMC1B	Q8NDV3	1235 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	WRNIP1	Q96S55	665 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	CDADC1	Q9BWV3	514 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	C1QTNF3	Q9BXJ4	246 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	DNAJC18	Q9H819	358 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	UPF2	Q9HAU5	1272 aa	Known RBP	5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	SERPINB13	Q9UIV8	391 aa		5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	DBR1	Q9UK59	544 aa	Known RBP	5.5	□□□□□ -1.53
COL21A1-204	ENST00000456983	CHURC1-FNTB	B4DL54	471 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	SLC27A2	O14975	620 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	PRPF40A	O75400	957 aa	Known RBP	5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	HTR3B	O95264	441 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	FGA	P02671	866 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	SLC3A2	P08195	630 aa	Known RBP	5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	CYP21A2	P08686	494 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	NCAM1	P13591	858 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	CNR2	P34972	360 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	CCNF	P41002	786 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	LIMS1	P48059	325 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	ST13	P50502	369 aa	Known RBP	5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	LMNB2	Q03252	620 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	BBS9	Q3SYG4	887 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	C12orf60	Q5U649	245 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	DCAF15	Q66K64	600 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	CREB3L3	Q68CJ9	461 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	GIMAP6	Q6P9H5	292 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	MOB2	Q70IA6	237 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	RALYL	Q86SE5	291 aa	Known RBP	5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	SLCO6A1	Q86UG4	719 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	NAT16	Q8N8M0	369 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	FNIP1	Q8TF40	1166 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	STAG1	Q8WVM7	1258 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	LOXL4	Q96JB6	756 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	SPATA25	Q9BR10	227 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	DHX36	Q9H2U1	1008 aa	Known RBP	5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	PI4KB	Q9UBF8	816 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	CTNNA3	Q9UI47	895 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	LOC285556	D6RIA3	1793 aa		5.49	□□□□□ -1.53
COL21A1-204	ENST00000456983	PLIN4	Q96Q06	1357 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	TSPY2	A6NKD2	308 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983		B4E1Z4	1266 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	ZNF213	O14771	459 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	RANBP6	O60518	1105 aa	Known RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	TOMM70	O94826	608 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	EFEMP2	O95967	443 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	AKR1B1	P15121	316 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	ZKSCAN1	P17029	563 aa	Predicted RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	BMP8B	P34820	402 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	SHMT1	P34896	483 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	GRM1	Q13255	1194 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	TAF1C	Q15572	869 aa	Predicted RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	ALX1	Q15699	326 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	SUPT20HL1	Q3ZLR7	823 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	SBK1	Q52WX2	424 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	FAM47A	Q5JRC9	791 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	AKNAD1	Q5T1N1	836 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	MFSD6	Q6ZSS7	791 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	STOX1	Q6ZVD7	989 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	C16orf86	Q6ZW13	317 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	FAM124A	Q86V42	546 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	RETREG2	Q8NC44	543 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	MAP4K1	Q92918	833 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	HOOK2	Q96ED9	719 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	TCEANC2	Q96MN5	208 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	JAKMIP1	Q96N16	626 aa	Known RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	ZNF341	Q9BYN7	854 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	SLITRK6	Q9H5Y7	841 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	GBA2	Q9HCG7	927 aa	Predicted RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	INCENP	Q9NQS7	918 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	CHST7	Q9NS84	486 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	PRR13	Q9NZ81	148 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	NTM	Q9P121	344 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	SWAP70	Q9UH65	585 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	PGAP2	Q9UHJ9	254 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	HERC5	Q9UII4	1024 aa	Known RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	ABT1	Q9ULW3	272 aa	Known RBP	5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983	PASK	Q96RG2	1323 aa		5.48	□□□□□ -1.53
COL21A1-204	ENST00000456983		E7EWF7	191 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	NMT2	O60551	498 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	EIF5B	O60841	1220 aa	Known RBP	5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	PRAMEF1	O95521	474 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	BRD1	O95696	1058 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	GH2	P01242	217 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	TSPY3	P0CV98	308 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	TSPY8	P0CW00	308 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	CPA1	P15085	419 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	CAST	P20810	708 aa	Known RBP	5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	HSPA4	P34932	840 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	ICA1	Q05084	483 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	GABPA	Q06546	454 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	TRDN	Q13061	729 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	VGLL4	Q14135	290 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	ZYX	Q15942	572 aa	Known RBP	5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	ABCB5	Q2M3G0	1257 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	ADCK5	Q3MIX3	580 aa		5.47	□□□□□ -1.53
COL21A1-204	ENST00000456983	CERKL	Q49MI3	558 aa	Predicted RBP	5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms