RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MYO10Q9HD67 2058 aa17.93■□□□□ 0.46
GPC1-206ENST00000455111 F8W810 466 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 TSPAN1O60635 241 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 LILRB3O75022 631 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 CTSAP10619 480 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 RFC5P40937 340 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 NHLH1Q02575 133 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 XKR9Q5GH70 373 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 DDX53Q86TM3 631 aaKnown RBP17.92■□□□□ 0.46
GPC1-206ENST00000455111 RNF149Q8NC42 400 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 PSPC1Q8WXF1 523 aaKnown RBP17.92■□□□□ 0.46
GPC1-206ENST00000455111 SLC7A3Q8WY07 619 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 IRAK3Q9Y616 596 aa17.92■□□□□ 0.46
GPC1-206ENST00000455111 C2CD4DB7Z1M9 353 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 LYPLA2O95372 231 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 PDGFBP01127 241 aaPredicted RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 ARL2P36404 184 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 ALDH7A1P49419 539 aaKnown RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 PTENP60484 403 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 CAPSQ13938 189 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 PTPN14Q15678 1187 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 GLB1LQ6UWU2 654 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 ALYREFQ86V81 257 aaKnown RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 IFNLR1Q8IU57 520 aaPredicted RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 CASP10Q92851 521 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 TMEM169Q96HH4 297 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 CPB2Q96IY4 423 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 JPH2Q9BR39 696 aaPredicted RBP17.91■□□□□ 0.46
GPC1-206ENST00000455111 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 HES2Q9Y543 173 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 PPME1Q9Y570 386 aa17.91■□□□□ 0.46
GPC1-206ENST00000455111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.9■□□□□ 0.46
GPC1-206ENST00000455111 POMCP01189 267 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 SPATA31C1P0DKV0 1188 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 HOXB8P17481 243 aaPredicted RBP17.9■□□□□ 0.46
GPC1-206ENST00000455111 NCLP19338 710 aaKnown RBP17.9■□□□□ 0.46
GPC1-206ENST00000455111 GLRA2P23416 452 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 RAB27AP51159 221 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 VCPP55072 806 aaKnown RBP17.9■□□□□ 0.46
GPC1-206ENST00000455111 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 PTPN21Q16825 1174 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 RNF168Q8IYW5 571 aaPredicted RBP17.9■□□□□ 0.46
GPC1-206ENST00000455111 GSTCDQ8NEC7 633 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 MTRQ99707 1265 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 RSAD1Q9HA92 442 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 IPPQ9Y573 584 aa17.9■□□□□ 0.46
GPC1-206ENST00000455111 FSD2A1L4K1 749 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 POTEMA6NI47 508 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 NRP1O14786 923 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 INPPL1O15357 1258 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 B4GALT5O43286 388 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 SKIP12755 728 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 XBP1P17861 261 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 RARRES1P49788 294 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 RARS2Q5T160 578 aaKnown RBP17.89■□□□□ 0.45
GPC1-206ENST00000455111 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
GPC1-206ENST00000455111 COLGALT2Q8IYK4 626 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 SLFN12Q8IYM2 578 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 CXCL16Q9H2A7 254 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.45
GPC1-206ENST00000455111 GPRC5CQ9NQ84 441 aa17.89■□□□□ 0.45
GPC1-206ENST00000455111 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.45
GPC1-206ENST00000455111 EDN1P05305 212 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
GPC1-206ENST00000455111 TXKP42681 527 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 NEK4P51957 841 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 DSC1Q08554 894 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 SIGLEC14Q08ET2 396 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 TCF15Q12870 199 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 ANKRD1Q15327 319 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 CALCRLQ16602 461 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 PIGOQ8TEQ8 1089 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 PBXIP1Q96AQ6 731 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 ZFP42Q96MM3 310 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 KLHL5Q96PQ7 755 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 NAP1L4Q99733 375 aaKnown RBP17.88■□□□□ 0.45
GPC1-206ENST00000455111 PCDHA12Q9UN75 941 aa17.88■□□□□ 0.45
GPC1-206ENST00000455111 USP34Q70CQ2 3546 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 ASAP2O43150 1006 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 MED24O75448 989 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 BRD1O95696 1058 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
GPC1-206ENST00000455111 CNPP09543 421 aaKnown RBP17.87■□□□□ 0.45
GPC1-206ENST00000455111 CA8P35219 290 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 GUCY1B3Q02153 619 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 OTUD6AQ7L8S5 288 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 TCP11Q8WWU5 503 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 WASF1Q92558 559 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 PGBD4Q96DM1 585 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 MFSD14AQ96MC6 490 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 GAD1Q99259 594 aa17.87■□□□□ 0.45
GPC1-206ENST00000455111 KIF2CQ99661 725 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms